Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1566 ATGAAATTCATGGGAGATAATAGTGGTAATGGTAATGGTAATGTTGATGCTATTCCATTATTTATTCATGGGTGTGAAAACATGAAGGTTATTACTAATAACCCTTCTATGTGTAGATTGGCTCCTCCATTAACAGCCATAGATAGGTTCTTATGGGGTCAACGACAAAGCAACTTTCCTCAAAGGCAACAACAACATCGAAATTTTGATATTGTAAAGACTAATAATCATCCAAGTAGTGTTTTTGATGAAGAGTTTTGCAAGATTGTGTGGCCTAATAATAGTAATTTCACTACTGGAGAAGGAACAAGCCTTGTTGATTATCATCATCATCTATTGGCAAATGAAGAGTCTTCTTTCAATTGGTCACACCAAATTCCCACATTGATGAAAGAAGATGTGCAAGTTTTAGGGAAGGATAGTGTGAAAGTGGTTGGAAGAAGACCTAAGAAAGGGTCTTCGTTGTCCTTGATCAAAGGCCAATGGACTGAAGAGGAAGACAAGAAATTGTTAAAGTTGGTGAAGCAACATGGTGTGAGAAAATGGTCTCAAATAGCTGAGAAGTTGGAGGGAAGGGCTGGCAAGCAGTGTAGAGAAAGATGGCATAATCACCTTCGACCAGATATCAAGAGGAGACAGAATTCTAAGAGAAAGAACAAGAGGCCTCAAATCTCAAATGGGAAGCCACAATCTTCAGTACTCCAAGACTACATTAGAAGCAACACACCCCTTAATGTTATTGGTAACAACAATAACACCATTACTACTATTACTACTCCTTCTATTAGTTCTACTTCAACAATATCTGAATCCATCATCACCAACATTAATGATGATAATAATAATCACTCATCATCATCACCAAATGTCATCCTAGGTGAATGTTATGATGAGGAACTTCTATTCTTGCAACAACTTTTCAAGGAAAATATTAATCATCATCATCAGATCCACCACCATCCAATTTTCAACACTGAAGGTGTTAATGATGAGAACAATTATAAGAATCACTCTTCCTTGGATCAGATGATGCTAACTGATAATGTGAATGATTTTGATGGTGGTGGTTTTGTTCATTCTTCCAATACTTACTATTCATCAAGTGCATATAATAATAACATGTACTTGGATGAGAGTACTTTCAATATTGTTCCTAGAAAGAGTACTTATCACAACAATAGTTACCTTGATTCTGATCTATATCACTCTCAATTGATGAATGGTGCTGCTAGTTCTTCATCAGCAATTTGCTATGATCAACATGGGAATCATCAGAATAACTACAACAAGATGGATTTTCAGATGGGGATTGAAGATTGCTCTGTTGGAAAAAGGGAAATGGATTTGATAGAGTTGGTTTGTTCTACTCAGTTTTAA 1377 0.3602 MKFMGDNSGNGNGNVDAIPLFIHGCENMKVITNNPSMCRLAPPLTAIDRFLWGQRQSNFPQRQQQHRNFDIVKTNNHPSSVFDEEFCKIVWPNNSNFTTGEGTSLVDYHHHLLANEESSFNWSHQIPTLMKEDVQVLGKDSVKVVGRRPKKGSSLSLIKGQWTEEEDKKLLKLVKQHGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKRRQNSKRKNKRPQISNGKPQSSVLQDYIRSNTPLNVIGNNNNTITTITTPSISSTSTISESIITNINDDNNNHSSSSPNVILGECYDEELLFLQQLFKENINHHHQIHHHPIFNTEGVNDENNYKNHSSLDQMMLTDNVNDFDGGGFVHSSNTYYSSSAYNNNMYLDESTFNIVPRKSTYHNNSYLDSDLYHSQLMNGAASSSSAICYDQHGNHQNNYNKMDFQMGIEDCSVGKREMDLIELVCSTQF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1566 458 MobiDBLite consensus disorder prediction 193 208 - -
Aev01g1566 458 SUPERFAMILY Homeodomain-like 159 209 IPR009057 -
Aev01g1566 458 SMART sant 158 207 IPR001005 -
Aev01g1566 458 CDD SANT 162 205 IPR001005 -
Aev01g1566 458 Pfam Myb-like DNA-binding domain 159 205 IPR001005 -
Aev01g1566 458 ProSiteProfiles Myb-like domain profile. 154 205 IPR001005 -
Aev01g1566 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 209 IPR017930 -
Aev01g1566 458 MobiDBLite consensus disorder prediction 193 232 - -
Aev01g1566 458 Gene3D - 158 211 - -
Aev01g1566 458 MobiDBLite consensus disorder prediction 209 223 - -
Aev01g1566 458 PANTHER MYB DOMAIN PROTEIN 64-RELATED 210 312 - -
Aev01g1566 458 PANTHER MYB DOMAIN PROTEIN 64-RELATED 153 211 - -
Aev01g1566 458 PANTHER MYB PROTEIN-RELATED 210 312 - -
Aev01g1566 458 PANTHER MYB PROTEIN-RELATED 153 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1566 Aev-Chr1 18982846 18986228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1566 41 456 MYB Transcription Factor Family AT5G58850 31.084 5.70e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev01g1566 Myb_DNA-binding 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1566 K09422 - gmx:100786295 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1566 01 18982846 18986228 Aev01g1566 01 18982846 18986228 ECH