Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1540 ATGGAAATTCGTGAAGTTCTGCGAACATACAACGCACGGCTGCCGCCGTCAACAAGGCCGCCCCAGCGGTGGCAGACCGCCCCGGCGGTGGTGCAGCCGCCCCAGCGGCCAAGACCACCCCAGCGGGACATGGCACCTAGCAGACGTAATAGGGATGACGCTGATGACCACGAGGAGGCAGGGCCGGAGAACGGTGTGACTCCTGAGGCTTTCATGGAAATGGCCAGAGCCATGCACCGCATGGTGGATCTTATGACGCAGCAGCCCACTCCCATTCAGCAGACAGTGCAGCCTACGGGTATGGATGCAGAGAATGCCCGTTTTTCTGAGTTCAAGAGGGCGAACCCTTCCCCATTTCTCGGCACTACCAACCCTTATGAGGTCGAGGATTGGCTGAGGGGTATAGAAGACATCTTCTCTGTGGTTCGGTGTTCCGAAGTCCAGAAGACTCGGTTTGCGGCCTTCATGCTTCAGATGGAGGCTCGTGCTTGGTGGACCGATGCTCGGGGTTACAGCTGCTGGACGACCTTGGACGAGGCGGCCTTGCACGCCGCGACCGCGGACGCGGCGGCTGCGCGGCTGGGCTGGGCTGGCCGCGGGCTACCAAACGCTTCAGAGAACAGAATACAGATCGAGGAGGGGAGAAAATTGAAACCGCTGCTTGAGCCGTGGACCGTCGGTTTTCGACCGGTTAACCGGCGGTTCGTGGCGGTTCCTTTCCGGCTTCCTCTTCTGCGGTTTCTTGGCCCAAATCGGATCGGATACCTCACCGGTTCGCGAGAGCCACCGCTCTTGTGTGGCTGGGGCAGCCTGAGGCGAACCGGCGACGGAAGGCGAAGACGAACCGGCGCGGCGACGGCGTGTGGCTCGGGCAGCAGCACGACGCGATTCCGACAAGGCGCAGCACGATTCCAACACGGTGCAGGCGTGCAGCAGGGTCGGGGCAGCGCAGAGGGTGCAGCGGAGCAGAGCAGAGTCGCAGCGGCGGCCGACGGTGAGCTGCAAATCCGCGGCAGCTGTGACCTTTCCAAAGCCAAGGGTAAGGTTCAGCTGCTGGGAGCTTCGAAAAGTAAATCTCATCTCAATCCTCCACTTGTCTTTATTCTTCTTCAGTTTTTCATCACCATGCCTGCAATTCCCGCTCCCACCACACCTAACTCCCACAAGCGCAGACTCAGATCCCACGCGCCCTCACGCTCCGATTCTCCCCCCATCCCGTCACCTCCGAAGTGGAAATCGCCTCGACGATCTTTCACTGCAACACCCAATTCCGCTGCAACTGAAAACGATGTTGTCACCCACGAAAACCAATCCAAATGGCAAAAACCTGAATATGTGAAGGGTGCTTGGAATCCCAAAGATGGTGAGCAATTGAGGATCGTGAAAGAGGCATTGCACCTGTCGACTGCGCCGTCTTCGATTGTGTGCCGTGAAGAGGAGCAGAATTTAGTTTTGGGGTTTTGCAAGGCAAGCATTGAGCACGAGAAGGCTGGGAGCTTGTACATTTGCGGGTGTCCTGGAACTGGTAAATCGTTGTCTATGGAGAAGGTGAAAGAGAATTTACTCAATTGGGCTGTAGAGGAAGGGTTTCCACAGCCAGATGTTTTATCAGTAAATTGTACAACCCTTGCAAATACATCTGATATTTTCACTAAGATTCTTGGGTCAAAGCAACCAAGGGGAAAGAAGGTTTTGGTGACACCCTTACAACAACTTCAGAACATTTATTCCCAGAAATCATCTACCAAGAACATGCTGTTGATAATAGCTGATGAATTAGATTATCTAATAACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTTACCACCTTCCCATTTTCCAGATGTATATTAATAGGGGTAGCAAATGCTATTGATCTAGCTGATCGATTTCTTCCAAGGCTTACATCACTAAATTGCAAGCCTACTGTTGTATCTTTTCGGGCCTACTCTAAAGATCAGATCCTTAGGATTCTTGAAGAAAGGCTAAATGAACTTCCTTACACTGTGTTTCAACGTCAAGCACTGGAACTATGTGCTAGGAAAGTTGCTGCTGCTTCTGGAGATATGCGGAAAGCTCTTTGTATATGCAGGAGTGCAATAGAAATGCTAGAAGCTGAAATTAGAGAGTCTTCCTGTAATCTGATTACTCCATTGGAAGAGATATCATCCTCTGAACAAAATGTAGTGGCAGCTCCTGATGCTATGAAAAGACAGGAATTTGATATTGTAAGGATTGATCACATGGCTCTTGCCTTGTCAAAAACGTATAGATCCCCAGTCGTGGATACAATTCAATCTCTACCACATCATCAACAGATTATACTCTGCTCTTCTATGAGGCATTTCCGTGGAGTCAAGAAAGATACAATCCTTGGGGAGTTGTATAAATCTTACATGGACCTATGCAAATCATCACTAATTCCCCCAGCAGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTTAATGACCAGGGGCTAATTAAATTAGGACAATCACGAGAGGATAAATTGAGAAGAGTATCTCCAAAAGTTGATGAGAGCGATATCACTTTTGCACTGCAGGGAATCCGTTTTTTCCGGAACTGCCTTCAATGA 2607 0.5067 MEIREVLRTYNARLPPSTRPPQRWQTAPAVVQPPQRPRPPQRDMAPSRRNRDDADDHEEAGPENGVTPEAFMEMARAMHRMVDLMTQQPTPIQQTVQPTGMDAENARFSEFKRANPSPFLGTTNPYEVEDWLRGIEDIFSVVRCSEVQKTRFAAFMLQMEARAWWTDARGYSCWTTLDEAALHAATADAAAARLGWAGRGLPNASENRIQIEEGRKLKPLLEPWTVGFRPVNRRFVAVPFRLPLLRFLGPNRIGYLTGSREPPLLCGWGSLRRTGDGRRRRTGAATACGSGSSTTRFRQGAARFQHGAGVQQGRGSAEGAAEQSRVAAAADGELQIRGSCDLSKAKGKVQLLGASKSKSHLNPPLVFILLQFFITMPAIPAPTTPNSHKRRLRSHAPSRSDSPPIPSPPKWKSPRRSFTATPNSAATENDVVTHENQSKWQKPEYVKGAWNPKDGEQLRIVKEALHLSTAPSSIVCREEEQNLVLGFCKASIEHEKAGSLYICGCPGTGKSLSMEKVKENLLNWAVEEGFPQPDVLSVNCTTLANTSDIFTKILGSKQPRGKKVLVTPLQQLQNIYSQKSSTKNMLLIIADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPTVVSFRAYSKDQILRILEERLNELPYTVFQRQALELCARKVAAASGDMRKALCICRSAIEMLEAEIRESSCNLITPLEEISSSEQNVVAAPDAMKRQEFDIVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMRHFRGVKKDTILGELYKSYMDLCKSSLIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVSPKVDESDITFALQGIRFFRNCLQ* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1540 868 Pfam AAA domain 495 612 IPR003593 -
Aev01g1540 868 MobiDBLite consensus disorder prediction 381 438 - -
Aev01g1540 868 Gene3D - 644 722 - -
Aev01g1540 868 Gene3D - 455 643 IPR027417 -
Aev01g1540 868 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 375 867 - -
Aev01g1540 868 SMART Cdc6_C_2 778 857 IPR015163 -
Aev01g1540 868 CDD Cdc6_C 771 853 IPR015163 -
Aev01g1540 868 Pfam CDC6, C terminal winged helix domain 778 856 IPR015163 -
Aev01g1540 868 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 375 867 - -
Aev01g1540 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 711 IPR027417 -
Aev01g1540 868 Pfam AAA lid domain 674 708 IPR041083 -
Aev01g1540 868 MobiDBLite consensus disorder prediction 42 63 - -
Aev01g1540 868 MobiDBLite consensus disorder prediction 1 68 - -
Aev01g1540 868 MobiDBLite consensus disorder prediction 15 29 - -
Aev01g1540 868 Gene3D - 763 854 IPR036388 -
Aev01g1540 868 MobiDBLite consensus disorder prediction 305 324 - -
Aev01g1540 868 CDD AAA 480 638 - -
Aev01g1540 868 MobiDBLite consensus disorder prediction 414 434 - -
Aev01g1540 868 SUPERFAMILY "Winged helix" DNA-binding domain 763 866 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1540 Aev-Chr1 18497845 18513065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1540 386 867 Core DNA Replication Machinery Family AT2G29680 57.746 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1540 K02213 - gmx:100791200 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1540 01 18497845 18513065 Aev01g1540 01 18497845 18513065 ECH