Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1538 ATGGAAGATCTATGGCGATCAGCAACAGGCCAAGACCCACGACCCGACGACTACAGAGGTATCGAGTTCTGGTCCAACCCAGAACGCGCTGGCTGGTTAACCAAACAAGGTGATTACATCAAGACATGGCGGCGCCGCTGGTTCGTCTTAAAACAGGGGAAGCTTCTTTGGTTCAAGGACCCTTCCGCCGCATCGTCGCCCTCCTCCGTTCCTCGCGGCGTCGTCTCCGTCGCCGGGTGCCTCACCGTGAAGGGTGCCGAGGATCTGCTGCACAGGCCGGCGGCGTTCGAGCTGTCGACGCCGCAGTCGACTATGTTCTTCGTGGCCGACTCGGATAAGGAGAAGGAAGACTGGATCAACTCGATTGGACGCGCTATCGTGCAGCACTCGCGGTCACTCGCGGATTCTGAGGTTGTTGATTACGATAGTAATCGTAATAGCAAGAAGAATAATGATGTTAGTAGTGGCAGTGGTGGTGGTGATGATGATAAGAACAACTCCACGCGCTGA 510 0.5569 MEDLWRSATGQDPRPDDYRGIEFWSNPERAGWLTKQGDYIKTWRRRWFVLKQGKLLWFKDPSAASSPSSVPRGVVSVAGCLTVKGAEDLLHRPAAFELSTPQSTMFFVADSDKEKEDWINSIGRAIVQHSRSLADSEVVDYDSNRNSKKNNDVSSGSGGGDDDKNNSTR* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1538 169 PANTHER SESQUIPEDALIAN 1 144 IPR045188 -
Aev01g1538 169 SMART PH_update 27 129 IPR001849 -
Aev01g1538 169 MobiDBLite consensus disorder prediction 148 169 - -
Aev01g1538 169 SUPERFAMILY PH domain-like 23 127 - -
Aev01g1538 169 PANTHER PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING PROTEIN 1 1 144 - -
Aev01g1538 169 Gene3D - 24 140 IPR011993 -
Aev01g1538 169 ProSiteProfiles PH domain profile. 26 127 IPR001849 -
Aev01g1538 169 Pfam PH domain 28 126 IPR001849 -
Aev01g1538 169 MobiDBLite consensus disorder prediction 137 169 - -
Aev01g1538 169 CDD PH_AtPH1 29 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1538 Aev-Chr1 18478619 18479128 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1538 - - tcc:18590516 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1538 01 18478619 18479128 Aev01g1538 01 18478619 18479128 ECH
Aev01g1538 01 18478619 18479128 Aev07g0107 07 638432 647435 PCT