Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1514 ATGATTGAGAGTGACCAAGGAGCATTAACTGTAGAAGAGCGAGAAGCTACAAGGAAATACTGTTTTGAAGCTGCTCAACCAGGGGAAAATGAGGCTGGAAGTGGAGACCAAATGGAGAATGGAGCGGTTGGCACAACAAAAGGACTGCAATTTTTGCCCAAAAGGAGTTTGACTGCTGGATTTGTTCACATATATAGGTTTGTAAAGGATGAAAGATCTCTTGAACTTGTTCATAAGACTCAGGTTGAAGGTGTTCCTCCTGCTCTGTGTCAGTTCCAAGGAAGATTACTTGTGGGAATAGGACCTGTACTTAGGCTATATGATTTGGGGAAAAAGTGTCTGAAACCAAACAAATCAAGATGGCATATGATTGTAACCAGAAGGGTTCTTAGTAGATTGCAAGCTGACCATGGAAATCAGGGTCTCAACCATCTAGGGAAGCTTCGGGGAACTCATCCTAGCTCCGGCTGGAGTCTTGGAGCTCTTTGGAGTAATTTGGTCCCCGAAGACGGGGAGGGCCTCGAACCCCCAGGGACCCCCCCTCCTATGCAGGGGGATGATGAGCTCGTTGGAGGTGATGCGGAGCCTAACTATGGTGAGGAGATGCGAGGGGTTCGCCAAGCCCTCAACATCTTGATTCAGATGATGCAGAACCAGAATCAGAACCAGAATCAGAATCAGAATCAGGATCAGAACCAGAGGAGGGAAGAGGTTCCTCCGAACATGGACTACGAATCACCTAGGTCGGGACCTCAGGTTTTTGGTACCCTTGAAGTGACTCTGGAGGCATATCTTAGGCTGAACCCACCGACTTTGTCGGGGGAGTCCATGGAGGAAGACCCGGAGGATTTCTTGGATCGGGCCACTAGAGCTCTGTGTGCCCTTCAATGCCACGACGTGAGGGCCGTGGATCTGGGTCTCAACCATCTAGGGAAGCTTCGGGGAACTCATCCTAGCTCAGGCTGGAGTCTTGGAGCTCTTTGGAGTAATTTAATTTCGTCTCTGACCCAGGCTGTAATCGATTACTGTAATCGATTACCAATACCCTGTAATCGATTACTGCGGGAATGTAATCGATTACAGGTTAAGGCTAACATGGGACTCGAGGTCCCATGTGCCGGTCACGATCCGAGTTGGGTCGTGACAACTCTACCTGTTATAATCAGTAAATTGATCAACTGTAAGTGTCGGGTGATCACAGACATGGATGTTAATGAGTTACAACCAGTTGGGTTTGATGATTATAGAGTTAATAGTAGTGAAGGTGAAGCAGACGATGGAAATGATGCAGAGGTTAATATGGGTGAAAATGAGGTCCTTACTAATAAGGACGAAGGTATAAGTGTAGACTTTTTTAAAAATTCAATGGATAGTTCGGAGGAATGGTATGAATTGTACCGGGTATATGCGAAAAGTGCGGGGTTCGGTGTTAGGAAGGGCGATGTTTACTGGGACGATGAAGGCAATCTAACACACAGGAGATTTTTTTGTAGTCGACAAGGGTGTCGTGATGTAAGATGCTACACTAACAATAGGAAGAAGGATCACAAACCCGAGACTCGCACCAATTGTCAGGCAAAATTATCTGTTTACCTTGATAGAAGCAATGGTAGATGGAAGACTCGGACGCTTATTGAGGAGCACAACCATCAACTGACTCTGTTATGA 1668 0.4646 MIESDQGALTVEEREATRKYCFEAAQPGENEAGSGDQMENGAVGTTKGLQFLPKRSLTAGFVHIYRFVKDERSLELVHKTQVEGVPPALCQFQGRLLVGIGPVLRLYDLGKKCLKPNKSRWHMIVTRRVLSRLQADHGNQGLNHLGKLRGTHPSSGWSLGALWSNLVPEDGEGLEPPGTPPPMQGDDELVGGDAEPNYGEEMRGVRQALNILIQMMQNQNQNQNQNQNQDQNQRREEVPPNMDYESPRSGPQVFGTLEVTLEAYLRLNPPTLSGESMEEDPEDFLDRATRALCALQCHDVRAVDLGLNHLGKLRGTHPSSGWSLGALWSNLISSLTQAVIDYCNRLPIPCNRLLRECNRLQVKANMGLEVPCAGHDPSWVVTTLPVIISKLINCKCRVITDMDVNELQPVGFDDYRVNSSEGEADDGNDAEVNMGENEVLTNKDEGISVDFFKNSMDSSEEWYELYRVYAKSAGFGVRKGDVYWDDEGNLTHRRFFCSRQGCRDVRCYTNNRKKDHKPETRTNCQAKLSVYLDRSNGRWKTRTLIEEHNHQLTLL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1514 555 Pfam FAR1 DNA-binding domain 465 553 IPR004330 -
Aev01g1514 555 PANTHER - 457 553 - -
Aev01g1514 555 Gene3D - 29 134 IPR015943 GO:0005515
Aev01g1514 555 MobiDBLite consensus disorder prediction 168 198 - -
Aev01g1514 555 MobiDBLite consensus disorder prediction 221 250 - -
Aev01g1514 555 MobiDBLite consensus disorder prediction 221 235 - -
Aev01g1514 555 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 457 553 - -
Aev01g1514 555 Coils Coil 206 233 - -
Aev01g1514 555 Pfam CPSF A subunit region 36 116 IPR004871 GO:0003676|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1514 Aev-Chr1 18115298 18126511 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev01g1514 FAR1 3.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1514 K12830 - gmx:100775785 130.183