Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1484 ATGTGTTGCCGTTGCCGGCTTGCATCGCCGCTTCTAGCTCGCTCCGACGCCGCCGGTGCGTGCAACGGCGACGCCTCTTTCTCTCGTCCTTTCAAGCTTCCTCACCTCAGTAACGGCGGCGCCGCGCCCGACTCCTCCGCATCCCAGCCACTCCTCCCTGGTCGCGCCTCCGATCCCGTCATCTCTAACCCAGCACCGCCGCGGCTGGGTTGTCCCCCTTCTCTCTCAAATGCCCGAATGCCCAACCCCTGTATTCTATGCGTGTGTGTGGTGAGTTTAGAAGCTCTTCAGGTTTGTAGCCATAGCCACCAGCAGCATCAGCATCAGCGACACCATCACCACTCTTCTCTGCTTCTCCCAAAAATGGGTATCTCACGTGATTCCATGCACAAGAGGCGCGCCACTGGCGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCAAACACAAAGCTATCAAGCAACAAAACGGTTAGGAGGATTAGGGTTCGAGGTGGGAATGTGAAGTGGCGTGCTTTGAGGCTCGATACTGGGAATTACTCATGGGGGAGTGAAGCTGTGACTCGCAAGACGAGGATTCTTGATGTGGTGTATAATGCATCCAATAATGAGCTGGTTCGAACTCAGACATTGGTGAAGAGTGCTATTGTTCAGGTTGATGCTGCACCTTTCAAGCAGTGGTATCTGCAACATTATGGTGTTGACATTGGTCGCAAGAAGAAGGGTGCAACTTCGGCCAAGAAGGAAGGAGAGGATGCTGAAACTGCGACTGAGGAAGTGAAGAAGAGTAACCATGTCTTGAGAAAGCTGGAAAAGCGTAAGCAGAACCGGGTGCTTGATGCTCACATTGAAGAACAATTTGCAGGTGGTCGACTTTTAGCTTGTATCTCATCTCGGCCTGGTCAATGTGGTCGTGCTGATGGATATATATTAGAGGGGAAAGAACTTGAATTCTACATGAAGAAGATTCAGAGGAAGAAGGGCAAGGGTGCTGCTTAA 1020 0.5176 MCCRCRLASPLLARSDAAGACNGDASFSRPFKLPHLSNGGAAPDSSASQPLLPGRASDPVISNPAPPRLGCPPSLSNARMPNPCILCVCVVSLEALQVCSHSHQQHQHQRHHHHSSLLLPKMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKGATSAKKEGEDAETATEEVKKSNHVLRKLEKRKQNRVLDAHIEEQFAGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1484 339 MobiDBLite consensus disorder prediction 247 268 - -
Aev01g1484 339 Gene3D - 283 336 - -
Aev01g1484 339 Gene3D - 153 282 - -
Aev01g1484 339 Coils Coil 260 280 - -
Aev01g1484 339 ProSitePatterns Ribosomal protein S8e signature. 132 151 IPR018283 GO:0003735|GO:0005840|GO:0006412
Aev01g1484 339 CDD Ribosomal_S8e_like 126 318 - -
Aev01g1484 339 PANTHER 40S RIBOSOMAL PROTEIN S8 122 339 - -
Aev01g1484 339 Pfam Ribosomal protein S8e 126 318 IPR022309 -
Aev01g1484 339 PANTHER 40S RIBOSOMAL PROTEIN S8 122 339 IPR001047 GO:0003735|GO:0005840|GO:0006412
Aev01g1484 339 MobiDBLite consensus disorder prediction 36 66 - -
Aev01g1484 339 TIGRFAM eS8: ribosomal protein eS8 122 320 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1484 Aev-Chr1 17540075 17550489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1484 122 327 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.951 7.54e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1484 K02995 - gmx:100527325 406.757