Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1476 ATGACAACACCAACACTACCATCACACAACACCAACATTCTCTCTTTATTAACTTTCGCCGTTACTCTCATCATAACTTCCGTTACCTCCGTCAATTCCCTCGGCTCCGCCTCCACCGCCGCCGTCACTTACGCAACCGCCACCGTCTGCGCCATCGTAGCCGGGGACACCAAACACGTCATCAAATGCTACGAACAACAGAAGAACGAGAACCAGAACAAGTATAACTATGATTATGCTACAATTGCACCACCTCTGGTGGTGGTGCTTCCCGACGACGTTTCATTTCAGGAAATCTCCGGCGGTCGGAGCTTCTTTTGCGGCCTCCGGTCCGGCGGACTCAGCCTTTACTGTTGGGACACCAATGCACCGGGATCGGTGTTTCTACCGAAGAGGATTTACCACAGTGACGTTGTGCAGTTGACCGATGTAACGGTTGGTGATTCTCAGGTTTGTGCCAGAGAGCTGCATTCTGGTGTGGTAAGGTGTTGGAGAGGAGGCAGTGTTGAAAAAGGGTTTGAGTTTCATTCACCTGGTGAGGAGTATAAGTTCAGAACCATCACTTCTGGGTGTGGTTTCTCTTGTGGGGTATTAATGGAGAATGGGAAGGTTTTGTGTTGGGGAGATAAGACTAAGAACAATGCTAGTTTTAGTGGTAATGAAATTCAGGCACAATTTGGTAACTTGTCTATGTCAAGTTTAGTTGCTGGTGTGTCACATGTTTGTGGCTTAACAATTGAAGGGGTTTTGGTATGCAAAGGGAAAAATGATTCTGGCCAATTGAATGTGCCTTTAGGTTCAGGCCCTTCAGAATTTTCAGGCCTTGCTCTGGGAGAAAATTTCACTTGTGCTATTCAGCGCCGGAATGGACTTGTTCTGTGCTGGGGAAGTGGTTCCAATAGTTCTGTGTCTGGTGTTAGTGGTGTTTCTTTTGAGTCAATTGTTGCTGGTTTGGATTTTGTGTGTGGTGTGACCACTATGAATTTATCTGTGATGTGTTGGGGTCATGATTGGTTAAGCAATAATAATAAGGATAACAGTTTGATTAGTGAGATTCCATTGGGAATGGTTCTTCCTGGAATATGTGTCTTAGGTGGTTGTGGTTCTTGTGCTTCATATCCAAATTCTGGATCTTTTTCTAGCAAAAAACAGAACAACTCTGGAACATTGAGGAGGCATAGAAGTGGTAACTCATCATCATCAAAGCATGTAGACAAGACTGAGAGTTTTTCATTGTACGAACTAGCCATATCCACAAACAAGTTCTCGGTCGATAGCAAGATTGGCGCCGGTAGCTTTGGCAGTGTTTACAAAGGGAAGCTAGAAGATGGTCGCGACGTCGCGATCAAAAGAGGCGACACAAGCACCATGAAGAAGAAATTCCAGGAGAAAGAAATTGCATTTGATTCTGAATTGGCATTGTTGTCAAGGCTTCACCACAAGCACTTAGTGAAGCTAATTGGATTCTGTGAGGAAAATGATGAGAAACTCTTGGTTTATGAGTACATGAGCAATGGATCACTCCATGACCATTTACATGACAAGAAAAATGTTGAGAAAAGTAGCAGCATCTTGAATTCATGGAAGATGAGGATTAAGATTGCACTAGATGCAGCTAGGGGAATTGAGTACATTCACAACTATGCAGTTCCACCAATTATCCACAGAGACATAAAATCCTCAAACATACTTTTAGACTCAAATTGGAATGCAAGAGTTTCTGATTTTGGATTATCACTTATTTGGCCTGAGACTGAGAAAGAATTGATGTCTACAAAAGCAGTTGGAACAGTTGGTTACATAGATCCAGAGTACTATGTTTTAAATGTGTTAACCACAAAAAGTGATGTTTATGGTTTTGGAGTGGTATTATTGGAGCTTCTAACTGGGAAAAGAGCAGTGTTCAAAATAGAAGATAGTAAGTTTAGTCCTGTGGGAGTGGTGGAATATGCAGGGCCAATAATTGCATCAGGGGATATTTGGAGTGTGTTGGATTGCAGAGTAGGGAAACCAGAAGTTAATGAGGTTGAGTCTATTAAGATCATGGCTTACACTGCTATGCATTGTGTGAACTTGGAAGGAAAAGAGAGGCCTGATATGACTGAAATTGTTGCCAGATTAGAGAGGGCATTGGATTTTTTTGAGGGTAGCCCTACTAGCCTCTCTATTGCATCATGTTCTAAGAGATTTGTCATCTGA 2199 0.4284 MTTPTLPSHNTNILSLLTFAVTLIITSVTSVNSLGSASTAAVTYATATVCAIVAGDTKHVIKCYEQQKNENQNKYNYDYATIAPPLVVVLPDDVSFQEISGGRSFFCGLRSGGLSLYCWDTNAPGSVFLPKRIYHSDVVQLTDVTVGDSQVCARELHSGVVRCWRGGSVEKGFEFHSPGEEYKFRTITSGCGFSCGVLMENGKVLCWGDKTKNNASFSGNEIQAQFGNLSMSSLVAGVSHVCGLTIEGVLVCKGKNDSGQLNVPLGSGPSEFSGLALGENFTCAIQRRNGLVLCWGSGSNSSVSGVSGVSFESIVAGLDFVCGVTTMNLSVMCWGHDWLSNNNKDNSLISEIPLGMVLPGICVLGGCGSCASYPNSGSFSSKKQNNSGTLRRHRSGNSSSSKHVDKTESFSLYELAISTNKFSVDSKIGAGSFGSVYKGKLEDGRDVAIKRGDTSTMKKKFQEKEIAFDSELALLSRLHHKHLVKLIGFCEENDEKLLVYEYMSNGSLHDHLHDKKNVEKSSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEKELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGFGVVLLELLTGKRAVFKIEDSKFSPVGVVEYAGPIIASGDIWSVLDCRVGKPEVNEVESIKIMAYTAMHCVNLEGKERPDMTEIVARLERALDFFEGSPTSLSIASCSKRFVI* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1476 732 MobiDBLite consensus disorder prediction 380 395 - -
Aev01g1476 732 Pfam Protein kinase domain 423 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g1476 732 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 381 720 IPR044815 GO:0004674
Aev01g1476 732 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 14 380 IPR044815 GO:0004674
Aev01g1476 732 ProSitePatterns Protein kinases ATP-binding region signature. 428 450 IPR017441 GO:0005524
Aev01g1476 732 Gene3D Transferase(Phosphotransferase) domain 1 503 716 - -
Aev01g1476 732 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 381 720 - -
Aev01g1476 732 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 14 380 - -
Aev01g1476 732 ProSiteProfiles Protein kinase domain profile. 422 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g1476 732 MobiDBLite consensus disorder prediction 380 403 - -
Aev01g1476 732 Gene3D - 173 353 IPR009091 -
Aev01g1476 732 SUPERFAMILY RCC1/BLIP-II 88 338 IPR009091 -
Aev01g1476 732 Gene3D Phosphorylase Kinase; domain 1 382 502 - -
Aev01g1476 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Aev01g1476 732 SMART serkin_6 422 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g1476 732 SUPERFAMILY Protein kinase-like (PK-like) 396 708 IPR011009 -
Aev01g1476 732 Gene3D - 19 172 IPR009091 -
Aev01g1476 732 CDD STKc_IRAK 428 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1476 Aev-Chr1 17440127 17443411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1476 389 727 Receptor kinase-like Gene Family AT3G55950 65.805 1.38e-144 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aev01g1476 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1476 - - jcu:105631222 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1476 01 17440127 17443411 Aev01g1476 01 17440127 17443411 ECH
Aev10g1733 10 19432445 19435096 Aev01g1476 01 17440127 17443411 ECH