Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1458 ATGTGTACCGGTTCTATGATCAAGCTCCCCGAAACCTGTTCGGTTATGGAAGATGCATCCAGAAACCAAGAAGGGTTGCATCATAAAATTTCTATTTTGCTTGAATTTTCAGCCTCTGATGATATAATTGGATTCAAGGATGCTGTTGAGAAAAAGGGTCATGATGTATGTGAGGTGGGGTTGTGGTATGGGAGAAAGGTTAATTCAAAAGAAATGGGGTATGAAGAGCGAACCCCTCTTATGATTGCTGCGATGTTTGCAAGCAAAAATGTTTTATCTTATATTCTTGGAACAGGAAAAGTTGATGTTAACCAGACTTGTGGATCAGATGGTGCTACTGCACTTCATTGTGCTATTGCTGGGGGTTCTTCTGATTCCCCTGAGGTTATCAAGCTTTTGCTTAATTCGTATGCAAATGTTAATGTTGTTGATACCAATGGTAATCGATCACGTGACTTGATTGATTCATTTTCTACTAGTATCTTCAATTCAAGAAAAAAGGTAATAGAAGCCATTTTAGAAGGTGAGAGTGGTGTTAATGGTGCTTACGCTGCATTATTTAATGAAGCTGTTGACCTAGTGGAGAGGCAAGAAAGGCTACAAGACATTGATTCGCCTCGATTTTCAATGGAAAAGAAAGATTATCCTATCGATCTTTCTCTTCCAGACATAAACAATGGAATGTACAGTACAGATGAATTTAGAATGTATACATTCAAAGTGAAGCCTTGTTCAAGGCCTTATTCTCATGATTGGACAGAGTGCCCCTTTGTTCATCCAGGCGAAAATGCGAGGCGACGCGATCCGAAGAAATATCATTATAGTTGTGTCCCTTGCCCTGAATTCAGGAAAGGATCTTGTTGCAAAGGGGATTCATGTGAATATGCACATGGAATTTTTGAGTGTTGGCTTCATCCTGCACAATACAGAACAAGGCTTTGCAAAGATGAAACAGAATGTCCAAGGAGAGTTTGCTTCTTTGCTCACACACGAGAAGAGCTTCGCCCCTTGTATGCTTCAACCGGCTCTGCTTTACCTTCTCCCACATCACATTCACCTGATTCTTCTCCATTCGAGATGGGTTCAGTTAGCTCTTTCATCCTTGGTTCTCCATGTGGTGGATCTTCTCCAACCAGGTGGCACACTCATCAACCTCATGTTTCTGTCCCTACCCTTCAGCTACCCAAAAGCAGATTCAAAAATGCAGTGAAAGCTAGAGATGTTGATTTAGACATCAAATTGATTGGAATCGAAAATCGTCGGCTTATGCAGCAGCAAATGATTGATGATATTTCAGGTGTCCCATCACCTTCCAAATGGATAAATTCCGCGCCTAATAGTCCTTCTTTTCAGCTCTCTCCAGGAGTGAAGCCTACTAACCGTGACGACATTTATATGCCTCAACTGCAATCTCCAACCGGAACTCCAGTTAATCAGAATGTGAACCAGCATATGCAAGGCTATTCCTGCAATCTTTCCCCTTCAAATGTGATTGGATCACCATCATATAGGGTTGATCCATCGGAAAGGAGCCAAAGCTATAATATTGAGCATGGTGGAAAGTTGAGTTGTAATTCTCCTTCTTCCTCTAAAGCTATGGAGCCATCAGCATCTACTTTGTTTGGTTGGGGCTCCCCTGATGGCAAATTAGATTGGTCAGTCCGCGGAGAAGAACTGAATAAGACGAGAAAATCTGCTTCTTTTGGATTGCGAAACAGCACTAGTCCAACAATAATGACTACAACTCCAGTACTACCAGATGTTATTGATGAATATGATGCATCTTGGGTTAATTCACTTGTGAAGGATGCTACACCTATGGAATTTTATCAGTATAGTGCTTCTGAAAAGCAACATCAAGATTTGGAACGCTATGCTAATGATGGAACGGAACCAATTCCTGCTTGGTTTTAG 1914 0.4127 MCTGSMIKLPETCSVMEDASRNQEGLHHKISILLEFSASDDIIGFKDAVEKKGHDVCEVGLWYGRKVNSKEMGYEERTPLMIAAMFASKNVLSYILGTGKVDVNQTCGSDGATALHCAIAGGSSDSPEVIKLLLNSYANVNVVDTNGNRSRDLIDSFSTSIFNSRKKVIEAILEGESGVNGAYAALFNEAVDLVERQERLQDIDSPRFSMEKKDYPIDLSLPDINNGMYSTDEFRMYTFKVKPCSRPYSHDWTECPFVHPGENARRRDPKKYHYSCVPCPEFRKGSCCKGDSCEYAHGIFECWLHPAQYRTRLCKDETECPRRVCFFAHTREELRPLYASTGSALPSPTSHSPDSSPFEMGSVSSFILGSPCGGSSPTRWHTHQPHVSVPTLQLPKSRFKNAVKARDVDLDIKLIGIENRRLMQQQMIDDISGVPSPSKWINSAPNSPSFQLSPGVKPTNRDDIYMPQLQSPTGTPVNQNVNQHMQGYSCNLSPSNVIGSPSYRVDPSERSQSYNIEHGGKLSCNSPSSSKAMEPSASTLFGWGSPDGKLDWSVRGEELNKTRKSASFGLRNSTSPTIMTTTPVLPDVIDEYDASWVNSLVKDATPMEFYQYSASEKQHQDLERYANDGTEPIPAWF* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1458 637 ProSiteProfiles Ankyrin repeat region circular profile. 110 144 - -
Aev01g1458 637 SUPERFAMILY Ankyrin repeat 45 149 IPR036770 -
Aev01g1458 637 Gene3D - 24 199 IPR036770 -
Aev01g1458 637 ProSiteProfiles Zinc finger C3H1-type profile. 278 300 IPR000571 GO:0046872
Aev01g1458 637 PANTHER UNKEMPT FAMILY MEMBER 18 612 IPR045234 -
Aev01g1458 637 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515
Aev01g1458 637 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 18 612 - -
Aev01g1458 637 SMART c3hfinal6 308 331 IPR000571 GO:0046872
Aev01g1458 637 SMART c3hfinal6 273 299 IPR000571 GO:0046872
Aev01g1458 637 SMART ANK_2a 110 142 IPR002110 GO:0005515
Aev01g1458 637 SMART ANK_2a 75 105 IPR002110 GO:0005515
Aev01g1458 637 Gene3D - 274 336 - -
Aev01g1458 637 Pfam Ankyrin repeats (3 copies) 48 144 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1458 Aev-Chr1 17205383 17207296 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1458 28 605 C2H2 Transcription Factor Family AT5G12850 37.156 2.15e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev01g1458 Ank_2 8.3e-10 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1458 - - aprc:113846970 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1458 01 17205383 17207296 Aev01g1458 01 17205383 17207296 ECH
Aev07g2110 07 22185787 22187823 Aev01g1458 01 17205383 17207296 ECH