Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1455 ATGAGTAATAATGGTTCCAAGTTGAATCCTTCTCAAACATGTTTGGTTGTGAAGAATGTGTATGGAAAACAACATGGCTTGCATCCGAAATCTTCTATTTTACTTGAGTTTTCAGCCAATGATGATGCAACTGGATTCAAGGATGCTATAGAGAAAAAGGGTCATGATATATGTGAGGTGGGATTGTGGTATGGGAGAAAGGTTGGTTCAAAGGGAGTAGGGTATGAAGAGAGAACCCCTCTTATGATTGCTTCAATGTTTGGAAGCAAAAATGTTTTATCTTATATTATTGGAACAGGTAAAGTTGATGTTAATCAAGCTAGTGGATCAGATGGTGCTACTGCACTTCATTGTGCTATTGCTGGGGATCCTTCTACTTCCCTTGAGGTTATCAAACTTTTGCTTAATTCATCTGCAAATGTTAATGTTGTTGATGCAAATGGTAACCGACCTCGTGACTTGATTGTTTCATTGTCTAATAGTATCTTCAATTCATTAAGAAAGAGGGTATTTGAAGCCACTTTAGAAGGTAAGGATGGTATTGATGATGCTTGCCCTGCATTAGACGAAGTGGTTAGTCCGGCGGGGAGACAACACCGACAGGAAGATATGGAATCGCCTCGCATTTCAACCGAGAAGAAAGATTATCATATTGATCTTTCTCTTCCAGACATAAATAATGAAATATTCAGTAGTGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACAGAGTGCCCATTTGTTCATCCAGGGGAAAATGCGAGGCGTCGTGATCCGAAGAAATATCATTATAGTTGTGTCCCTTTCCCTGAGTTTAGGAAAGGATCTTGCAGCAATGGTGAGTACTGTGAATATGCTCACGGAATTTTTGAGTGTTGGCTTCACCCTGCACAATACAGAACAAGGCTTTGCAAGGATGAGGCAAAATGTTCCAGGAGAGTTTGCTTCTTTGCTCACACGCCGGAAGAGCTTCGCCCGTTGTATGCTTCCACCGGTTCTGCTTTACCTTCTCCCACATCATATTCACCTGGTGCTTCTTCATTTAAGATGAGGAAGTCTGCATCTTCTGGATTATTGCAAAACACCACTGGTCCATTAGCAACGGCTACAACTCCAATACTACCAGATGTTATTGATGAACATGATTTCTCTTGGGTTGATTCACTTGTGAAGGATGCTACACCAATGGAATTTGTTCATCATTATAGTGTTGATGCAGAATAA 1257 0.4041 MSNNGSKLNPSQTCLVVKNVYGKQHGLHPKSSILLEFSANDDATGFKDAIEKKGHDICEVGLWYGRKVGSKGVGYEERTPLMIASMFGSKNVLSYIIGTGKVDVNQASGSDGATALHCAIAGDPSTSLEVIKLLLNSSANVNVVDANGNRPRDLIVSLSNSIFNSLRKRVFEATLEGKDGIDDACPALDEVVSPAGRQHRQEDMESPRISTEKKDYHIDLSLPDINNEIFSSDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPKKYHYSCVPFPEFRKGSCSNGEYCEYAHGIFECWLHPAQYRTRLCKDEAKCSRRVCFFAHTPEELRPLYASTGSALPSPTSYSPGASSFKMRKSASSGLLQNTTGPLATATTPILPDVIDEHDFSWVDSLVKDATPMEFVHHYSVDAE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1455 418 ProSiteProfiles Ankyrin repeat profile. 111 146 IPR002110 GO:0005515
Aev01g1455 418 Pfam Ankyrin repeats (3 copies) 54 145 IPR002110 GO:0005515
Aev01g1455 418 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 21 360 - -
Aev01g1455 418 SUPERFAMILY Ankyrin repeat 43 157 IPR036770 -
Aev01g1455 418 Gene3D - 281 337 - -
Aev01g1455 418 ProSiteProfiles Ankyrin repeat region circular profile. 111 145 - -
Aev01g1455 418 PANTHER UNKEMPT FAMILY MEMBER 21 360 IPR045234 -
Aev01g1455 418 SMART ANK_2a 111 143 IPR002110 GO:0005515
Aev01g1455 418 SMART ANK_2a 76 106 IPR002110 GO:0005515
Aev01g1455 418 Gene3D - 32 171 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1455 Aev-Chr1 17195133 17196389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1455 32 386 C2H2 Transcription Factor Family AT5G12850 46.438 2.32e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev01g1455 Ank_2 2.5e-09 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1455 - - gmx:100806121 509.99