Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1435 ATGAGAACACGAAATGCCGATTCCGCGTGCAAATCCGCAACCCCTAAGAAGACCCTGCCGGCGAGGAAAGCCGCCGTTAAAACCGCCGTAGAATCCTCCGCGACCAAGCGCATGTCCGCCGCCAAAACGAGACAGATAAAGAAGAAGGACTCCTCGCCTGCATCCAACCCGATCCCCGAGGAAATATCGGCTGATGAGCTGAAATCATCTGGGGCTGTTACAACCACAAATTCGTCAAAGAGGACGCCTGGGAGACCGAGAAAAACAGTTGCCACTCCAAAACTGGTAGAGAAATTGGAGGCAGTTGCTTGTGGAACTCCAGTTGTGGATGACTCTAGGGCATTGGATAAATCGGAAGAGCCTCAAGATGTTGAAGTAGTCGATGCTAGTAATATTGATAGCAAGAAAGTGGGGGAACAAGGTGTTGGGTGCATTGGACAATCCAAAGAGAAGGAACAAAAGCGTATGGGAGTGGATGAACCAATTGTTGAAAAGGTTTGTAAATTGACAGATAAGATTAATGCTGTGGAGGTTGAAATAACTGCTTCTCATGATACCTTGAGTTCTTTCAAATGGCCAGACCGCACCCTTGTGGATCTTAATATATCAGTGGATGATGAAGATGCTATTGATCCATCTGAGGGAGAGAGAGGAGAGGAAGAGTTGAAGAAGCAGGAAGGAGGGAAAGGGGATGAAGATAGGAAGGAACGAGAGGGAGAGAAAAGAGATGAGTTGATGGAACAAGATGGAGGTAAAGGAGGGGAAGAGTTGAAGGAACAAGAGGAAGAGAACAAAAAGGAAGAATTGAAAGAACATGATGGTGATAGAGGAGAAGAAGCATTGAATGAACCGGAGGGAGATAAAAGAAAGGAAGAGTTCATACAGGAGGGAGAGAAAGCTATGGAAGACTGCAAGGAAGATGAAGCAAACATTATTGGACACAAAGAACATTCTAATATCAAGTCTTTTAATGCAGAAGTGATAGACCATATGCAACAATATGTTAATCCTAGAAAACATAGTGATCAAGGAACAAAGAGTAGCTCAAAGCTAGATCTTGGAGAACAAGGTGGGGAGGACCATATTGTGGAAGATCTGGAGGAAGATCCAGAAGAAACCGATGCACGGGAAGAGGAGCATATGGAATTGGAGGCCATTGCAAAACAGCAAAAGATTAAGAAAGAACATGAGATATTTGTTGGAGGGCTTGATCGGGATGCTGAAGAGGAAGATCTGAGAAAAGTTTTTCAGAGGATTGGGGAGGTAGCTGAAATCAGGTTGCACAAAAATTCATCAACGAATAAAAATAAGGGCTATGCATTTGTGAAGTTTGCTAATAAGGAACATGCAAAGAAAGCTTTGTCGGAAATGAAGAACCCTGTTATATGTGGTAAAAGATGTGGCACTGCACCTAGTGAGGATAATGACACACTATTCTTGGGAAATATTTGCAACACATGGACAAAAGAAGCTATAAAATGGAAGTTGAAGGATTATGGTATTGAAGAGGTTGAAAACATTACACTTGTGCCAGATGTTCAACATGAAGGATTGAGCCGTGGCTTTGCATTCCTTGAGTTCTCTTGTCATGCTGATGCTATGGTTGCATACAAGAGACTTCAAAAGCCTGATGCCATCTTCGGCCATCCTGAGCGAAGTGCTAAAGTAGCCTTTGCTGAACCCATGCGTGAACCACACCCAGATATAATGGCACAGGTGAAGTCTGTGTTTGTTAATGGTATTTCCTCCCACTGGGATGAAGATCACGTTAAGGAACTGTTTAAATCTTATGGTGAAATTGTAAGAATTGTACTGGCACGGAATATGCCTACAGCTAAGAGGAAGGATTATGGATTTGTTGATTTCTCGACACATGAAGCTGCTGTAGCTTGTGTTGAAGCTGTAAATAAATCTGATTTGTCTGATGGGGCATCAAAGATAAAAGTAAGAGCTAGGCTATCAAATCCGTTGCCTAAAACACAAGCTGTAAAGGGTGGTATGTCTGGTGGGTTCAGAATTGTTCATACTCATACCAGGAGTGGAGCCTTTGCAAGATCTGGAAGGGGTTTTGGGTGGGGAAGACAACCCTTCAATAATTGGGAAAATATAAACAGGGACAGGAATGTCTATCGTGGTAGACACAGACAAATTGGACGAATGGGTTTCTGGAATGGACCTGACTTTAATAATATGTATCCAGATTTTCATCACAGGCAGTTTGGTCGACAAGGCGCTGCGAGGGGTGGACATTATCCTAGTAGCAGAGGTGCTGCATTTGCTGGACCTTATCATGATAGAGAATGGTACGGCATTGTTGCAGAAGCCCCTAGTGAGCCTTTTCCTTCAAGAAGACCCTATTCCCCAGTTGGACAGTTTGACAGGCCATATATGGGAAGACATTTTGATGATCTGTATTTTTATGATGAAAATGTGCATGGGATGAAACGCCCATTTTTTATGACTGATCTTGATCCTGATTATATGGGGCCTAACAGACTGCGCCCTCGATTGGATTACCCAGATCCATCTTTATTTCATGAAAATCATTACCATGATTCTTTTGGATCTGGCAGCAGACAGTACCCACATGACTATTCTGGTCCTGATTATGGTGGAGGACCATACTCATCTTTTTATGGGGATGATAGCTCACATGGGCGTGGATACTACTATTAG 2676 0.4324 MRTRNADSACKSATPKKTLPARKAAVKTAVESSATKRMSAAKTRQIKKKDSSPASNPIPEEISADELKSSGAVTTTNSSKRTPGRPRKTVATPKLVEKLEAVACGTPVVDDSRALDKSEEPQDVEVVDASNIDSKKVGEQGVGCIGQSKEKEQKRMGVDEPIVEKVCKLTDKINAVEVEITASHDTLSSFKWPDRTLVDLNISVDDEDAIDPSEGERGEEELKKQEGGKGDEDRKEREGEKRDELMEQDGGKGGEELKEQEEENKKEELKEHDGDRGEEALNEPEGDKRKEEFIQEGEKAMEDCKEDEANIIGHKEHSNIKSFNAEVIDHMQQYVNPRKHSDQGTKSSSKLDLGEQGGEDHIVEDLEEDPEETDAREEEHMELEAIAKQQKIKKEHEIFVGGLDRDAEEEDLRKVFQRIGEVAEIRLHKNSSTNKNKGYAFVKFANKEHAKKALSEMKNPVICGKRCGTAPSEDNDTLFLGNICNTWTKEAIKWKLKDYGIEEVENITLVPDVQHEGLSRGFAFLEFSCHADAMVAYKRLQKPDAIFGHPERSAKVAFAEPMREPHPDIMAQVKSVFVNGISSHWDEDHVKELFKSYGEIVRIVLARNMPTAKRKDYGFVDFSTHEAAVACVEAVNKSDLSDGASKIKVRARLSNPLPKTQAVKGGMSGGFRIVHTHTRSGAFARSGRGFGWGRQPFNNWENINRDRNVYRGRHRQIGRMGFWNGPDFNNMYPDFHHRQFGRQGAARGGHYPSSRGAAFAGPYHDREWYGIVAEAPSEPFPSRRPYSPVGQFDRPYMGRHFDDLYFYDENVHGMKRPFFMTDLDPDYMGPNRLRPRLDYPDPSLFHENHYHDSFGSGSRQYPHDYSGPDYGGGPYSSFYGDDSSHGRGYYY* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1435 891 CDD RRM_SF 478 541 - -
Aev01g1435 891 CDD RRM_SF 398 466 - -
Aev01g1435 891 SMART rrm1_1 477 554 IPR000504 GO:0003723
Aev01g1435 891 SMART rrm1_1 575 650 IPR000504 GO:0003723
Aev01g1435 891 SMART rrm1_1 397 470 IPR000504 GO:0003723
Aev01g1435 891 MobiDBLite consensus disorder prediction 203 375 - -
Aev01g1435 891 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 396 474 IPR000504 GO:0003723
Aev01g1435 891 Gene3D - 475 560 IPR012677 -
Aev01g1435 891 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 476 561 IPR000504 GO:0003723
Aev01g1435 891 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 366 884 - -
Aev01g1435 891 PANTHER NUCLEOLIN-LIKE ISOFORM X1 366 884 - -
Aev01g1435 891 SUPERFAMILY RNA-binding domain, RBD 397 640 IPR035979 GO:0003676
Aev01g1435 891 SUPERFAMILY RNA-binding domain, RBD 471 543 IPR035979 GO:0003676
Aev01g1435 891 MobiDBLite consensus disorder prediction 68 85 - -
Aev01g1435 891 MobiDBLite consensus disorder prediction 337 352 - -
Aev01g1435 891 Gene3D - 561 722 IPR012677 -
Aev01g1435 891 Gene3D - 365 474 IPR012677 -
Aev01g1435 891 MobiDBLite consensus disorder prediction 361 375 - -
Aev01g1435 891 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 574 654 IPR000504 GO:0003723
Aev01g1435 891 MobiDBLite consensus disorder prediction 216 323 - -
Aev01g1435 891 CDD RRM_SF 576 650 - -
Aev01g1435 891 MobiDBLite consensus disorder prediction 1 93 - -
Aev01g1435 891 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 478 542 IPR000504 GO:0003723
Aev01g1435 891 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 576 640 IPR000504 GO:0003723
Aev01g1435 891 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 398 466 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1435 Aev-Chr1 16905940 16910027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1435 398 642 Eukaryotic Initiation Factors Gene Family AT2G23350 25.194 1.92e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1435 - - gmx:100784338 1044.65