Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1424 ATGAAGTGGGAAATAGAAGTACTCTCTCCTTCCTATGTTCACAACAACAACAACAATTCCTACCATTGGCTTCTTGGAGATAGTAATAGTAATAACAATAACAATAGGAGCACAAAATGGACCCCTGTAGAGAATAAACTGTTTGAAAATGCTCTTGCTTTGCATGATAAGGACACACCAGATAGGTGGCTCAGGGTTGCTGAGATGATACCAGGGAAGAGTGTCATGGATGTGATGAATCAGTATAAGGAATTGGAAGCTGATGTTTTTAACATAGAAGCTGGTTTAGTACCTGTTCCTGGCTATAGTACTAGTACTACTACTACTACTACTACTACTACCTCACCTTTTACTTTAGATTGGATGAGTGGTTCTGGGTTTGATGGGTTTAAAGGTGTTTCTGCAAAGAGATCTTCATCAAGAACTCCAGAACAGGAAAGGAAGAAAGGTGTGCCATGGACTGAGGAAGAGCACAAATTGTTTCTACTGGGTCTGAAGAAGTATGGCAAAGGTGATTGGAGAAACATATCGCGCAATTTCGTTATCAGCAGGACCCCGACACAGGTTGCTAGCCATGCGCAGAAGTACTTCATAAGGCAACTTTCAGGGGGAAAGGACAAGAGAAGGGCCAGCATCCATGACATAACAACAGTTAATCTCACAGATAACAGAACTTCTCCTTCAGAAGACAATAAAAGATCGAATTCGCCACATCATCGTTCAATGATGCTTTCGCACCAGCAACAGCCAAATTCTACTGCTAGTAACAACACATCTTTGGCACATTTCAAGTGGAATAATAAGTTAAATTCAGGTGTAGCTATGACATTTAGTCGCGCAAATGATGAAGTGTTCATGTCACCTTCTTTTGGTGTTAACTCCTATGGTCTCAAGATGCAGGGCCAAAATCTGCATAAAAGTGCTCTTCATGAGTCTTCTAATGCAACCTTCCCAACACTATTCTAA 966 0.4099 MKWEIEVLSPSYVHNNNNNSYHWLLGDSNSNNNNNRSTKWTPVENKLFENALALHDKDTPDRWLRVAEMIPGKSVMDVMNQYKELEADVFNIEAGLVPVPGYSTSTTTTTTTTTSPFTLDWMSGSGFDGFKGVSAKRSSSRTPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTDNRTSPSEDNKRSNSPHHRSMMLSHQQQPNSTASNNTSLAHFKWNNKLNSGVAMTFSRANDEVFMSPSFGVNSYGLKMQGQNLHKSALHESSNATFPTLF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1424 321 MobiDBLite consensus disorder prediction 208 258 - -
Aev01g1424 321 MobiDBLite consensus disorder prediction 133 152 - -
Aev01g1424 321 Gene3D - 31 99 - -
Aev01g1424 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 145 201 IPR017930 -
Aev01g1424 321 ProSiteProfiles Myb-like domain profile. 145 197 IPR001005 -
Aev01g1424 321 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 305 - -
Aev01g1424 321 SUPERFAMILY Homeodomain-like 146 200 IPR009057 -
Aev01g1424 321 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Aev01g1424 321 ProSiteProfiles SANT domain profile. 153 201 IPR017884 -
Aev01g1424 321 ProSiteProfiles Myb-like domain profile. 32 86 IPR001005 -
Aev01g1424 321 CDD SANT 39 85 IPR001005 -
Aev01g1424 321 MobiDBLite consensus disorder prediction 238 258 - -
Aev01g1424 321 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 148 200 IPR006447 GO:0003677
Aev01g1424 321 SMART sant 36 88 IPR001005 -
Aev01g1424 321 SMART sant 149 199 IPR001005 -
Aev01g1424 321 Gene3D - 151 201 - -
Aev01g1424 321 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 305 IPR043363 -
Aev01g1424 321 Pfam Myb-like DNA-binding domain 152 197 IPR001005 -
Aev01g1424 321 Pfam Myb-like DNA-binding domain 39 84 IPR001005 -
Aev01g1424 321 CDD SANT 152 197 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1424 Aev-Chr1 16763859 16765642 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev01g1424 Myb_DNA-binding 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1424 - - gmx:778181 407.527