Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1419 ATGGTTGTCATGGACCACCAGTCTACTAGAATTGGTTGTTCAATCCGGAGCTATCATGCTAAACTGTTTGAGAACAAAGTCTCTGAAGGTCAAGCATATATTTTATCAAACTTTAATATTATTCCCAATGATGGCCGGTATAAGCCAACACGCCACGAATTTAGAATCATGTTTAAGAGAGATACCCAAACACGTCAAATAGAGGACAATTCAATTCCAAGCAATTCATTTGACTTTATCCCTAACTCTGCCATACTATCCGAGGAGAAAGAAGATTCCCATCTCCTAGATGTTATTGGTTTGTTGACAGCTAAAGGGAACTTATCAACCATATCAAAGGACGGGAAAGACCTCAAACTCATTCAGCTGGAATTGGATGACCTTGAGAGTAATGATAGGATTAAATGCACCTTGTGGGAAGAATTTGCAGTGCAATTTGACAAGTTTGTCAAGGAAAACAAAGCATCTGAATACATCATAGTACTACAACTTGTCAAAATGAAGAAATTCAGAGGTGTTATGGGCGTGTCTAATGCCACCTACACTACTAACCTTTTGATCAATGAAGATATGGCAGAAGTCAAGCAATTTAGGCAAAGGTTATGTCTTATGGATTCCAGCTTATGCCAAGTTGTTTCTCAAATTGATAATGATCCAACCTACTCTTTAGTTGATGAATTCATCTCTATTCATCATTTCAAACCCATTCAGGAACTAAAAGAATTTAGTGAGGTGGAAAAGGGAATATTTGTGACATTTGGAATGGTAAAGGAGATTGAAACTGAGTACAACTGGTGGTACAAAGCATGTCCGAAGAAAAATGAATACCCTGTTGAGATTACTTCATTGATTCACAAGAAATTCCTCATGAAGGTTTCCGTGAAAACTGAAGACCTTAACTCATTTCAACCAACTGTGATAACCATACTTAAGCTCTCATGTGATCCTGCATTGATTTCCGCTTTCAAGGCCAAATACAAAATTAACGATCTAGGATTCATTCCTGATAACTCAGATGATAGTTGCAGTTTGGTTGAAGCTTCGGCCACAACTAAGGAAAGCTCGCCTCAAACCTGTAACCTTGCAGAGGTTACAGCAGAAAACAACCATATCACTCCCCTAAAGAATTCTGATGAGAAGGAGTTGGTAGTCAAACGCTCAAAAACATCGTCCAACCAGTGCAGTGTCTCATCCTGTAAAGTCCGGAAGTTGATTTTTGAGGACGATGATTGA 1233 0.3861 MVVMDHQSTRIGCSIRSYHAKLFENKVSEGQAYILSNFNIIPNDGRYKPTRHEFRIMFKRDTQTRQIEDNSIPSNSFDFIPNSAILSEEKEDSHLLDVIGLLTAKGNLSTISKDGKDLKLIQLELDDLESNDRIKCTLWEEFAVQFDKFVKENKASEYIIVLQLVKMKKFRGVMGVSNATYTTNLLINEDMAEVKQFRQRLCLMDSSLCQVVSQIDNDPTYSLVDEFISIHHFKPIQELKEFSEVEKGIFVTFGMVKEIETEYNWWYKACPKKNEYPVEITSLIHKKFLMKVSVKTEDLNSFQPTVITILKLSCDPALISAFKAKYKINDLGFIPDNSDDSCSLVEASATTKESSPQTCNLAEVTAENNHITPLKNSDEKELVVKRSKTSSNQCSVSSCKVRKLIFEDDD* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1419 410 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 1 288 - -
Aev01g1419 410 CDD RPA1_DBD_A_like 1 62 - -
Aev01g1419 410 Gene3D - 1 70 IPR012340 -
Aev01g1419 410 SUPERFAMILY Nucleic acid-binding proteins 1 68 IPR012340 -
Aev01g1419 410 PANTHER REPLICATION FACTOR A 1, RFA1 1 288 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev01g1419 410 CDD RPA1_DBD_B_like 97 201 - -
Aev01g1419 410 Pfam Domain of unknown function DUF223 1 90 IPR003871 -
Aev01g1419 410 Gene3D - 71 205 IPR012340 -
Aev01g1419 410 SUPERFAMILY Nucleic acid-binding proteins 77 201 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1419 Aev-Chr1 16707119 16709528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1419 30 198 Core DNA Replication Machinery Family AT2G06510 31.609 8.25e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1419 - - adu:107461640 268.855