Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1376 ATGTTGTATCGCATGCCGCTGAATACTATTGATGGAGACTTAGTAAGGTACGGTTGTTGTGATATTAGCAATGATGAAGATGTTATTATGATGTTTGATTATCATTGTAAATTTCCGAATATACATCTTGTGGAATTGTATGTTGTTGTTGGAGATACAAATATTAGGCATATACCAAGTTCTGGTGGATCCGCACCTACCCCAATTCATGGCGTTGCTGTTGTTGCACGTGAGGAACCTATTGTTAGGTCTAGGGGACAACCGCAAAATGATGAAAATATAGTCATTTGTCCGTCACAAGTTGCAGGGATGTTGGGCAATGTTAATGATTATGAATCTCCAATTCAAGCGTGCAATTACAATGAACAAGATTTTGATGATGATGATACTCATGAACCATTTGAAGTTCCAGATGATGACATAGATGGGGTAGGTGTGACGCCTATTAGTCAAAATGTTACGCAACCTCCAGCTCAATCACAAGTGGGAGAGGTTGCACACTACACTAATCTGAATTTGGCGGCAATGGGGGATTTCAATGCAGCTGGTTCATCTTGCCTCACTATTCCTGGTGATATATCTGGTGAGAAAAATATATGTGTCGGTCAACAATTTCCAAACAAAGAATCTGTGCTTCTTGGATTAAAGAATTATAGCATTCGTAGAGGCGTTGAGTATAAAGTTTATGAATCTGATCCAAAGAAGTACCTTGTTAAGTGCAAACTATTTGGGAGATGGTGTATGTGGAGTGTTCGGGCCACTTACCGTGTGAGGTTAGGGCTTTGGAAAATCAGGAGTTATAATGCCGATCACACATGCATGACATCAGCTGTTCCTCAAAATCACTTACAACTAGACGTTGATGTCATTGCAAGTAACATTTTTGGAATTGTGGAAGGCGACCCTACCGTACCTGTTAGAGTGTTGCAGGATTCAATCCATGAGAAGTACGAATTTACTCCGTCCTACCGGAAAGCATGGCTTGCAAAGCAAAAGGCTATAGCTCGAATATATGGAGATTGGGAGGAGTCCTACAATGAACTACCAAAGTGGCTTCTTGCTATGCAGCATTGTGCTCCAGGCACTGTTGTGGAGATACAGACTGCTCCCTATTACAATGGAAACTTGGTTGACCATTCTTGTGTTATGTTCAGTCGTGTGTTTTGGAATTTTCCGGCATGTATTGAAGGTTCAAGCACTGCAAGCGATTTGTCTCCATTGATGGCAGCGATTGATGCTGAAGGTAATGAGTGGAAAGAACCTCATGCATATCATGCCTATTGTATCCGACATATCGCTTCTAATTTTGCTCTTAGATTCAATAACAAAGAGGCAAAGAGACACCTGGTAAATGCAGCATATGCGAAGACCGAGTCTGAATTTGAATACTATTATGGACTTGCAACTGGGTTTAATCCGGAAGCGCATGCATGGATGGGAAAAATCCCTTTGAGGAAGTGGGCCCAACACGCAGATGAAGGGCGAAGGTATGGCCACATGACCACAAATCTTTCTGAGTGTGTCAATGCAGTTTTGAAAGGCGTTAGGAATCTCCCTATAACTGCAATTGTCAAAGCCACATATTTTCGTTTGGGAAGTCTATTTCGTAAAAAGGGGAAGACAGCCCAAGCACAAGTCGCAGCTGGAGAGATATTTTCACAGTTCCTCTTGAACGAAATTCAGAAAAATCGTGAAGAGATGATGGGCAATATGTTTGTCTCTAGCTTTAGTAGGAGCGACCAGGCTTTCACAGTTCAGGTGCAAGGACCAGTTGGAACTTGGAGTCAGAGGACTTTTGCTGTTAGGTTAGGGGAGCGAAAATGTGATTGTGGTTATTTTCAAGCTCTGCACTTTCCTTGTTGTCATGTTCTTGCTGCTTGCTCATATCCAGAGGTTAGACTCGATTGGAGCTCTTATGTTGATGATGTTTACCGGATGGAAAATGTGTTGAATGTATATGCCATGGAATTTCCTCCAATTGCAAATGAATCATCATGGCCTTCGTACTCCGGACCACGTTTGAGACCCGACCCTGAGCTCAGGAGGGCTAAAGAAGGAAGACCAGTTTCTACCAGGATTCGTAATGAGATGGATGAAGTGGAGACTGGTCGAGGGAAGCGTTGTGGTCTTTGCCGTCAGCAACTGAATTCGCGATTCACAACAAGTTACTTTGCACAACTGCCAAATCATGTAAAATTTAGGATACCTACTGGATCTGAATGGCTTATGAAGGTTGAAAAAAGGGACAACGAGGTTTGGTTGACAGATGGATGGACTGATTTTTTGGAGTCGTGCATGATTGATAGCAAACGTTTCATATGGATGGATTACGATGAGCTAATGACATTTAAGATTAATATTCATGATGCAAACCATGTTGAGATTGACTACAAGCCAATTGAGGAAGCACTAGATCTACGCTTTAATACTGAACACTAG 2439 0.4198 MLYRMPLNTIDGDLVRYGCCDISNDEDVIMMFDYHCKFPNIHLVELYVVVGDTNIRHIPSSGGSAPTPIHGVAVVAREEPIVRSRGQPQNDENIVICPSQVAGMLGNVNDYESPIQACNYNEQDFDDDDTHEPFEVPDDDIDGVGVTPISQNVTQPPAQSQVGEVAHYTNLNLAAMGDFNAAGSSCLTIPGDISGEKNICVGQQFPNKESVLLGLKNYSIRRGVEYKVYESDPKKYLVKCKLFGRWCMWSVRATYRVRLGLWKIRSYNADHTCMTSAVPQNHLQLDVDVIASNIFGIVEGDPTVPVRVLQDSIHEKYEFTPSYRKAWLAKQKAIARIYGDWEESYNELPKWLLAMQHCAPGTVVEIQTAPYYNGNLVDHSCVMFSRVFWNFPACIEGSSTASDLSPLMAAIDAEGNEWKEPHAYHAYCIRHIASNFALRFNNKEAKRHLVNAAYAKTESEFEYYYGLATGFNPEAHAWMGKIPLRKWAQHADEGRRYGHMTTNLSECVNAVLKGVRNLPITAIVKATYFRLGSLFRKKGKTAQAQVAAGEIFSQFLLNEIQKNREEMMGNMFVSSFSRSDQAFTVQVQGPVGTWSQRTFAVRLGERKCDCGYFQALHFPCCHVLAACSYPEVRLDWSSYVDDVYRMENVLNVYAMEFPPIANESSWPSYSGPRLRPDPELRRAKEGRPVSTRIRNEMDEVETGRGKRCGLCRQQLNSRFTTSYFAQLPNHVKFRIPTGSEWLMKVEKRDNEVWLTDGWTDFLESCMIDSKRFIWMDYDELMTFKINIHDANHVEIDYKPIEEALDLRFNTEH* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1376 812 PANTHER POLYPROTEIN, PUTATIVE-RELATED 413 504 - -
Aev01g1376 812 SMART 26again6 606 633 IPR006564 GO:0008270
Aev01g1376 812 PANTHER - 413 504 - -
Aev01g1376 812 Pfam MuDR family transposase 199 257 IPR004332 -
Aev01g1376 812 Pfam SWIM zinc finger 583 628 IPR007527 GO:0008270
Aev01g1376 812 PANTHER - 278 397 - -
Aev01g1376 812 PANTHER POLYPROTEIN, PUTATIVE-RELATED 278 397 - -
Aev01g1376 812 SUPERFAMILY DNA-binding pseudobarrel domain 712 791 IPR015300 -
Aev01g1376 812 Gene3D - 705 792 IPR015300 -
Aev01g1376 812 ProSiteProfiles Zinc finger SWIM-type profile. 599 631 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1376 Aev-Chr1 15752918 15756413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1376 712 797 B3 DNA Binding Superfamily AT3G18990 26.744 2.04e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1376 - - aip:107621404 523.857