Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1346 ATGGAGTCTGCACGGTTACCCTCTGGCTCCGTCTTTATAGCAGCTCCGTCGCAGACCGCGATGAGCAAAACCACCCTCTTCACTTCAGTCGTGCGTCGAGATCGGGCTCGTTTTGATTCGAAACGCAAAATCGAACTTGCGTTTTACAGTTCTGGAGATCTCTGCATCAGCTTCCTCAAATCCACTGGTTTTATGGAGATATCATTGTTAAAGATGCTCGTTAATGGCTTATCCTCATTTTTACATTTATCCTTTTCTGCAAACATTAACTCAGAACCTGTCTCAAAGTATTACCAAAAGGCAGCAGACATACTTAAGTTGTTGAAGCCAGTCTTTGATGTGATTGTTAATTCTGAGTTAGCTTCTGATGAAGTGCTTAGTAAGATATTTGAAGAACTTGGTCTTGCTGTTGATGAATTAAGGGAGCATATTGACAACTGGCACCTATTGTCGAGCAAAGTTTACTTTGCTATGCAAGTGGAACCCTTGATATCTAGGATACGGACTTCTGTGCTCAATATTTTCTTGCAGCTGAAGGCTTCTCAGCAATCTCTGCCTGATGAATTGAGTTCTGAACATGTAGAGCACTGTGTTCAGAAACTTAAGCATTTGGTACATGAAGAAGCATTATCAGTCATTAAGGAAGCTATTAAGGAACAAGTGGAAGGTGTAGGACCCAGTCCAGAGCTCTTGGCAAAAATTGCTGATAGTCTAGGCCTAAAGTCTAATCAGGAGGTCCTGATTGAGGCTGTGGCCCTCGAAAAGTTGAAGGAAAATGCTGAACAAACTGAAAAGACTGCAGAAGCTGAATACATTGATCAAATGATTGCTGTTGTAACACGAATGCATGAGCGACTTATTATGCTTAAGCAAGCCCAAAGTAAAAGCCCAGTTCAAGTACCTGCTGATTTTTGCTGTCCTCTCTCTTTGGAGTTGATGACTGATCCAGTGATTGTGGCATCAGGGCAAACCTATGAGCGGGCTTTCATCAAAAACTGGATTGATCTTGGACTTACTGTTTGTCCAAAGACTCGTCAAACTCTAGGTCACACCAACCTAATACCTAACTACACTGTAAAGGCACTAATTGCAAATTGGTGCGAGTCCAACAATGTGAAGCTGGTTGATCCCACGAAATCTACAAATTTAAATCAAGCATCTGTCCTTCAGGGGTATATAGAGTCTGGTACAACAAGGGAGTCACCTGTTTTTGCTCATTCCAGAAGCAACCAGCCATCCTCGCCTGAGTCTGCTCGTTCTCGTTCTTTCAGTTCACCAGGTAATAAGTTAACTTCTTCTGAAATCCATCGAGAGGGAACATCACCATTGCATCCCCGATCAACATCAGAAGGTTCCTTAAGTGCCATGGTTAATGGGCAATACATGGATCTTGCAAGAATATCGCCCCCAGGTTTAGATGACAGGTCTGCTAGCTCAGATGAAGGCAGTGTTGGTTCAGTTGGCCATCCATCAGTGTCACCGTCTAAAAGGGAATCCTCTGGTGTCTCTATCTCTGATCAAGCTCAAGCCCATGTTAGAACTGTTTCTGATTCCAGTGCACTTTCTAGTGCAAGTTTTCCTCAAGAAACGTCAGGTGATGATAATAGTGCTCCTCAGCTGTCAACTAGTCCAGCCTACAGTAGAGAGGTTTCAGGTGAATTAAACGCGGGCTCAGATGCTGCTGGTGCTGCTGCCATGCCATCTTCGCACAGAGAACCTGAGTTCCCACCTCGATTGGTGGAGACAAGGTCTCGAAGCCAAGGTTTATGGCGGCGGCCATCAGAGAGGCTTGTTCCTAGGATGGTATCTTCTCCTGCTATTGAAACAAGAGCTGATCTTTCTGGTATTGAATCCCAGGTTCGGGATTTGGTTGAGGGCTTGAAGAGCTCTGATCTTGATACTCAGAGAGATGCAACAGCAGAAATCCGCCTTCTTGCTAAGCACAATATGGATAATCGAATTGCAATTGCAAATTGTGGAGCCATTAACGTATTAGTTGACTTACTTCGATCAACGGATACAAGGATCCAGGAAAATGCTGTTACAGCACTTCTCAACTTATCAATCAATGATAACAACAAAACTGCAATTGCAAATGCTGGTGCAATTGAGCCTCTAATTCATGTGCTCGAGACAGGGAGCCCAGAAGCCAAGGAGAATTCTGCTGCCACGCTTTTCAGCTTATCGGTAATTGAGGAAAACAAGATCAGCATCGGGAGGTCTGGGGCTATTAGACCACTGGTTGATCTATTAGGGAATGGAACCCCTAGGGGAAAGAAAGATGCTGCCACTGCTTTGTTTAATTTGTCAATATTTCATGAAAACAAGAATCGAATTGTGCATGCTGGCGCTGTGAAGCACCTCGTAGAGTTAATGGACCCAGCTGCTGGGATGGTTGATAAGGCAGTGGCTGTCTTAGCAAATCTTGCCACGATTCAAGAAGGAAGAAATGCGATTGGTTCAGAAGGTGGGATTCCTGTTCTGGTTGAGGTCGTTGAGTTGGGTTCTGCGAGAGGAAAAGAGAATGCTGCAGCGGCTCTTCTGCATCTTTGTTCTCATAGTAACAGATTTTTAAGCATGGTGCTTCAAGAAGGAGCTGTCCCACCATTAGTAGCTTTGTCACAGTCAGGCACTCCAAGGGCCAAAGAAAAGGCCCAGGCTCTCCTTAATCTATTTAGAAGTCAGAGACATGGTAACGCCGGGAGGGGCTGA 2712 0.4458 MESARLPSGSVFIAAPSQTAMSKTTLFTSVVRRDRARFDSKRKIELAFYSSGDLCISFLKSTGFMEISLLKMLVNGLSSFLHLSFSANINSEPVSKYYQKAADILKLLKPVFDVIVNSELASDEVLSKIFEELGLAVDELREHIDNWHLLSSKVYFAMQVEPLISRIRTSVLNIFLQLKASQQSLPDELSSEHVEHCVQKLKHLVHEEALSVIKEAIKEQVEGVGPSPELLAKIADSLGLKSNQEVLIEAVALEKLKENAEQTEKTAEAEYIDQMIAVVTRMHERLIMLKQAQSKSPVQVPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLGHTNLIPNYTVKALIANWCESNNVKLVDPTKSTNLNQASVLQGYIESGTTRESPVFAHSRSNQPSSPESARSRSFSSPGNKLTSSEIHREGTSPLHPRSTSEGSLSAMVNGQYMDLARISPPGLDDRSASSDEGSVGSVGHPSVSPSKRESSGVSISDQAQAHVRTVSDSSALSSASFPQETSGDDNSAPQLSTSPAYSREVSGELNAGSDAAGAAAMPSSHREPEFPPRLVETRSRSQGLWRRPSERLVPRMVSSPAIETRADLSGIESQVRDLVEGLKSSDLDTQRDATAEIRLLAKHNMDNRIAIANCGAINVLVDLLRSTDTRIQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLETGSPEAKENSAATLFSLSVIEENKISIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKNRIVHAGAVKHLVELMDPAAGMVDKAVAVLANLATIQEGRNAIGSEGGIPVLVEVVELGSARGKENAAAALLHLCSHSNRFLSMVLQEGAVPPLVALSQSGTPRAKEKAQALLNLFRSQRHGNAGRG* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1346 903 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 381 IPR013083 -
Aev01g1346 903 SUPERFAMILY ARM repeat 620 892 IPR016024 -
Aev01g1346 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 660 702 IPR000225 GO:0005515
Aev01g1346 903 SMART arm_5 812 852 IPR000225 GO:0005515
Aev01g1346 903 SMART arm_5 854 893 IPR000225 GO:0005515
Aev01g1346 903 SMART arm_5 690 730 IPR000225 GO:0005515
Aev01g1346 903 SMART arm_5 731 771 IPR000225 GO:0005515
Aev01g1346 903 SMART arm_5 649 689 IPR000225 GO:0005515
Aev01g1346 903 SMART arm_5 772 811 IPR000225 GO:0005515
Aev01g1346 903 Pfam Armadillo/beta-catenin-like repeat 733 770 IPR000225 GO:0005515
Aev01g1346 903 Pfam Armadillo/beta-catenin-like repeat 651 688 IPR000225 GO:0005515
Aev01g1346 903 Pfam Armadillo/beta-catenin-like repeat 690 729 IPR000225 GO:0005515
Aev01g1346 903 SMART Ubox_2 303 366 IPR003613 GO:0004842|GO:0016567
Aev01g1346 903 Coils Coil 243 273 - -
Aev01g1346 903 MobiDBLite consensus disorder prediction 465 592 - -
Aev01g1346 903 PANTHER U BOX DOMAIN-CONTAINING 71 899 - -
Aev01g1346 903 CDD RING-Ubox_PUB 304 346 IPR045210 -
Aev01g1346 903 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 71 899 - -
Aev01g1346 903 MobiDBLite consensus disorder prediction 479 549 - -
Aev01g1346 903 SUPERFAMILY RING/U-box 292 377 - -
Aev01g1346 903 MobiDBLite consensus disorder prediction 399 452 - -
Aev01g1346 903 Gene3D - 600 900 IPR011989 -
Aev01g1346 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 742 784 IPR000225 GO:0005515
Aev01g1346 903 Pfam U-box domain 300 370 IPR003613 GO:0004842|GO:0016567
Aev01g1346 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 701 743 IPR000225 GO:0005515
Aev01g1346 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 783 824 IPR000225 GO:0005515
Aev01g1346 903 ProSiteProfiles U-box domain profile. 299 373 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1346 Aev-Chr1 15286914 15294787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1346 260 903 U-box Gene Family AT2G23140 63.467 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1346 - - gmx:100811250 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1346 01 15286914 15294787 Aev07g2186 07 22923702 22926641 PCT