Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1169 ATGATAACCCAACAATCTGATTCACCAAACAACAAGAACAGAACCACGAACCCTTTGAGTCAAATGTTTCAGAACATATTCTCAGACAACAGCAACATCATGCTTGCAGCAATAATTTCATTGCTTCTTGTGATCCTCTTTGTTCTGCTTCTTCATCTCTATGCAAAGTGGTTCTTAGCTCAGGCACAAGCACAGGCACACGCCCGGAGACGGCGACGCCGCCTCCGGCGAGCCACGGTGACAGTTTCTGATGTCCTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAGGACTCACCAATTTCAAGTATCAACACAAAAGGGCTAGATTCTGCTATAATTGCAGCAATCCCAATTTTCATCTATGCAGCTTCAGAACCAGTGAAAGGAGGTGATAATAAGAATGATGATATTTATGATGACAAACAGAACAAGGTTGAACTTGAGCACGAACTTGAGTGTGTGATTTGTTTGAGTGCTTTTGAAGATGGTGAGATGGGAAGGTGTTTGCCAAAATGTGGACATGGTTTTCATGTGGAATGCATTGATATGTGGTTGAATACTCATTCCAATTGCCCAATTTGCAGGGCTCCAATTGTTGTTGGTGGGATTGTTGAAGTAATTCAGAGTAATGATCCTCAATTGGGTTCTGTTGATGGATTGGATCATGATCATGATCATGATCATGTTCATGATGATGATGATTCCTCTGCTTTTGTTGAGGTTGTTGTTGATGATGTTATTACTCCAACAATTTCTGAGATTAGAGAGAGTGATCAGAGTGGGAATGAGAATGGAGTGATGAGTGGTGATTCTGTTTCAGAAACTTCATCATCTAATTTGATGGTTGGTTGTTCTTTGAAGAGAATGCTTAGCAAAGTTTTCCCATCTTCCAATGTAAATGAATTACAAGCTTGA 927 0.411 MITQQSDSPNNKNRTTNPLSQMFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQAHARRRRRRLRRATVTVSDVLGPARFHHFHSFNIEDSPISSINTKGLDSAIIAAIPIFIYAASEPVKGGDNKNDDIYDDKQNKVELEHELECVICLSAFEDGEMGRCLPKCGHGFHVECIDMWLNTHSNCPICRAPIVVGGIVEVIQSNDPQLGSVDGLDHDHDHDHVHDDDDSSAFVEVVVDDVITPTISEIRESDQSGNENGVMSGDSVSETSSSNLMVGCSLKRMLSKVFPSSNVNELQA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1169 308 PANTHER RING FINGER DOMAIN-CONTAINING 7 306 - -
Aev01g1169 308 SMART ring_2 157 198 IPR001841 -
Aev01g1169 308 Pfam Ring finger domain 156 199 IPR001841 -
Aev01g1169 308 ProSiteProfiles Zinc finger RING-type profile. 157 199 IPR001841 -
Aev01g1169 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 203 IPR013083 -
Aev01g1169 308 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 7 306 - -
Aev01g1169 308 CDD RING-H2_EL5_like 156 199 - -
Aev01g1169 308 SUPERFAMILY RING/U-box 139 204 - -
Aev01g1169 308 MobiDBLite consensus disorder prediction 257 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1169 Aev-Chr1 12373893 12374819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1169 25 200 Rapid Response to Elicitors AT3G16720 33.523 8.33e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1169 - - adu:107473099 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1169 01 12373893 12374819 Aev07g2127 07 22426525 22427385 PCT