Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1144 ATGGACCCCGACGTTTCCCGGTGGGTGGCGGAATTCCTCCTCCGGAGCTCCGTCCCCGACACCCTCGTCGCCAAGACCGTTGCCGTCCTCCCCCTCTCCTCCGCCGATCCTCGCCTCAAGAAAACACTTCTCCTCCGCACCCTTCAATCGCAACTCTCCAATGCTTCCATCACCGAAACCACTCTCGAGATCCTCGAACACATCTCAGACATCGACCGAAACGACGCCGTTCCCATCCCTGACTCCATGTGCAGGGCATATTGCGCTGTCGCCGTCGAGTGCACCGTCAAGTACCTCGCTGCCCTCCCTGACGATGACTCCGGCGAGTACTTCTCCGCCGTGAGGCGGATCTGGCGCGGCCGTTTGGCGGATGTGGAGCTCCGCCGGAGTGATCTGTTCTCCGTCGAGATGGAGGAGTGGAGGGAGGCCGTCGAGGCCGCACTGTTAGACCCTAGGGTTTCGGAGAGGCTTGCGAATTTGAGCACTCGAAACGACGCGTTTAAAGAGTTGAGGGTGTATTTGAAGGAAGCGTTGGAAACTATGGGTCCTACGTTTCTCGATAAGCTTGCGGCAATGTCGAATAAGAAGAAGAATAAGGGTTTGAATTTTAGGAGTTTGGGCGGGGATCCAGTGTGGGCAGTTGTAATGGAAGGGTGCTCTAAGCCGGTGAGGGAGCATGGTGATAACCGTGATCATGGTGATGAAGTTTGTCATGATAATGCTGATAATGCTGATGATGATGGTGCATGTGGAATGGAAGGTGTGGTTATGAATGGTGGAGATCATGGGAAGGAACAATTGGAGGAAAGAGGTGAAGTTTCTTTTGATTTGAACCACGAACCTGCAACTGCATTGAAAGTGCCCCCACTATCCTCTAAGAAAGGCAGTCTTAAACACAAGAACCCTGCACTTCGCAGATGCCATAGGGGAGTTAAAATCTCTGGTTCTGAGAAATTGGACCCTGAAAAATCATGGAGCAAAGATGATCGTGTGCCTAGTGCTGAATTTAGAAAAGTTCGGGAATCCCTTAAATCAAGTTCAATGGAGTTGCGGACGTTGGTCAAGGATCCTCTTCCGGATGCATTGGGTTTATCTGAAGTTGCAAAATCTAAATTAGCATCAAAAAATACAAATCATGAGCCACCTATAGGAAACCAGAATGGACAAAGAGATGTGCCAAATTCAAATACTTGCAGGAGTATTGTACTTTATCAACCTAAAGATGCTAATCTTTGGAAATCGTCATCTCCTGTTGATGGTAATAATGTTCAGCTCGAGAAGAAGTCTTCTGCTCATTGTAGTAAAGTTGAAGTTCGAAGTCCCAGCTTAATGAAGCGAAATAGGACTGCTCAAAAATATGAGTGGGATGATTCAATAGATAACATGCCCCAAGTAATGCCATCAAGAAGGAAGAAAAGGAGATGGACTCCACTGGAAGAGGATACACTAAGAAATGGTGTAAAAATGTTTGGCGAGGGGAACTGGGCAGCAATTCGGAGTTTTTACAGTGAGATATTTGAAAGTAGAAGTGGAGTTGATTTGAAGGATAAGTGGAGAAACATGATAAGGTAG 1572 0.4796 MDPDVSRWVAEFLLRSSVPDTLVAKTVAVLPLSSADPRLKKTLLLRTLQSQLSNASITETTLEILEHISDIDRNDAVPIPDSMCRAYCAVAVECTVKYLAALPDDDSGEYFSAVRRIWRGRLADVELRRSDLFSVEMEEWREAVEAALLDPRVSERLANLSTRNDAFKELRVYLKEALETMGPTFLDKLAAMSNKKKNKGLNFRSLGGDPVWAVVMEGCSKPVREHGDNRDHGDEVCHDNADNADDDGACGMEGVVMNGGDHGKEQLEERGEVSFDLNHEPATALKVPPLSSKKGSLKHKNPALRRCHRGVKISGSEKLDPEKSWSKDDRVPSAEFRKVRESLKSSSMELRTLVKDPLPDALGLSEVAKSKLASKNTNHEPPIGNQNGQRDVPNSNTCRSIVLYQPKDANLWKSSSPVDGNNVQLEKKSSAHCSKVEVRSPSLMKRNRTAQKYEWDDSIDNMPQVMPSRRKKRRWTPLEEDTLRNGVKMFGEGNWAAIRSFYSEIFESRSGVDLKDKWRNMIR* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1144 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 469 523 IPR017930 -
Aev01g1144 523 Pfam Myb-like DNA-binding domain 472 521 IPR001005 -
Aev01g1144 523 MobiDBLite consensus disorder prediction 371 395 - -
Aev01g1144 523 ProSiteProfiles Myb-like domain profile. 467 522 IPR001005 -
Aev01g1144 523 PANTHER MYB TRANSCRIPTION FACTOR 1 523 - -
Aev01g1144 523 CDD SANT_TRF 473 523 - -
Aev01g1144 523 PANTHER MYB TRANSCRIPTION FACTOR 1 523 - -
Aev01g1144 523 SUPERFAMILY Homeodomain-like 469 522 IPR009057 -
Aev01g1144 523 Gene3D - 465 523 - -
Aev01g1144 523 SMART sant 471 523 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1144 Aev-Chr1 11957012 11959740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1144 475 522 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 7.59e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev01g1144 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1144 - K11111 lang:109345201 518.85