Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1133 ATGGAGTTTGTTGTGGCTTCCTCCTCTGATGACGGCGGGATAGGCTGCTGGGACCTCCACACTGGGGCGGAGCAGCTCCGCCACAAGTCATGCTCTTCCCCTCCTCATGGCCTCGTCTCCGTTGGTGGCCGCTTCCTCGCTTCTTCTCAGCTTCAAGATTCTTCAGCCACCTCTGGCCAGGTTCTCTACTGGTCATGGCCCAAGACTCAACCTGAAGTTAAGAGCTTTCCAGCTGAAGTTATTCAGCCCCTTGCTGCTAACCACTCAGGCACCTATTTAGCTGGTGGGGGTGTGTCAGGTGAAATCTACTTTTGGGAGGTTGAAACTGGTAGGCTGCTTAAGAAGTGGCATTCGCATTACATGGCTGTTACTTGCCTTGTATTTTCTGAAGACGACTCACTCCTGATATCTGGTTCATTTGATGGATCTGTGAGAGTTTGGTCCCTCTTCATGATATTTGATGATTTAATGAGTCAAGAAGCAAATCATCTTTATCAGTATAGCTTTTCGGGGCATACCTTGTGTGTAACTGATGTTGTGATTGGTAATGGAGGGTGCAATGCAATAATTGTGTCAGCTTCAAAGGATCGGACTTGTAAGGTGTGGAGCTTATCTACAGGAACACTACTAAGAAATATCGCATTCCCAGAAGTAATTGATTCCATTGTATTGGATCCTGCTGAACATGTCTTTTATGCTGGCTGTAGAGATGGAAATATATACATTGCTGCACTTCACATTGAAAACATTGCTACTAGTAGTTATGGGATGCATATAATTGATTCATTTTCTAGCAACAGCAAGAGTGTTACTTGCTTGGCATATGGAATTAGCAAGAATTTGTTAATATCTGGGTCAGAGGACGGAATGATTCGTGTTTGGGATTTGAGAACTCGTGGCATTGTTCGCATGTTTAAACATGCTAAAGGACCGGTAAATAATATTGTGGTTGTTAGACCTGAAATTGATTCAATTAGTAATAAATCTTCTAATTTACAAGCACACTCAAGAAAGAAGGGGTCAAATTTACCCCCTCGACTGGAAAAATTTGCAAACGAAGCTGATGAAAACTCAGATTTCAAGACCGTTATCAGCTGCGGCGGTGGCAGGAGTTGCACCGATGTTTCATATCTCAGTTCTCATGTGATATCTACTCACCTTAAGGAACTTCAGCATCAAGGTTCTACCGCTGCTTCTGAAATGGAGATGGAGAGATTAAAACACGATGGCCAGAGATCAATGGAAATGGTTAATCAGTGGAAGAAAATGTATGAAAACTTGCATCAATTTTGTGTGAAGGAGCTCTTAGATGGTAGTCAAGAAAGATGA 1329 0.4304 MEFVVASSSDDGGIGCWDLHTGAEQLRHKSCSSPPHGLVSVGGRFLASSQLQDSSATSGQVLYWSWPKTQPEVKSFPAEVIQPLAANHSGTYLAGGGVSGEIYFWEVETGRLLKKWHSHYMAVTCLVFSEDDSLLISGSFDGSVRVWSLFMIFDDLMSQEANHLYQYSFSGHTLCVTDVVIGNGGCNAIIVSASKDRTCKVWSLSTGTLLRNIAFPEVIDSIVLDPAEHVFYAGCRDGNIYIAALHIENIATSSYGMHIIDSFSSNSKSVTCLAYGISKNLLISGSEDGMIRVWDLRTRGIVRMFKHAKGPVNNIVVVRPEIDSISNKSSNLQAHSRKKGSNLPPRLEKFANEADENSDFKTVISCGGGRSCTDVSYLSSHVISTHLKELQHQGSTAASEMEMERLKHDGQRSMEMVNQWKKMYENLHQFCVKELLDGSQER* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1133 442 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 263 298 - -
Aev01g1133 442 PANTHER WD-REPEAT PROTEIN 18 1 435 IPR045227 -
Aev01g1133 442 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 5 315 IPR011047 -
Aev01g1133 442 PRINTS G protein beta WD-40 repeat signature 190 204 IPR020472 -
Aev01g1133 442 PRINTS G protein beta WD-40 repeat signature 135 149 IPR020472 -
Aev01g1133 442 PRINTS G protein beta WD-40 repeat signature 282 296 IPR020472 -
Aev01g1133 442 SMART WD40_4 69 106 IPR001680 GO:0005515
Aev01g1133 442 SMART WD40_4 256 295 IPR001680 GO:0005515
Aev01g1133 442 SMART WD40_4 162 203 IPR001680 GO:0005515
Aev01g1133 442 SMART WD40_4 109 148 IPR001680 GO:0005515
Aev01g1133 442 SMART WD40_4 206 244 IPR001680 GO:0005515
Aev01g1133 442 PANTHER WD REPEAT-CONTAINING PROTEIN 18 1 435 - -
Aev01g1133 442 Gene3D - 2 217 IPR015943 GO:0005515
Aev01g1133 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 169 212 IPR001680 GO:0005515
Aev01g1133 442 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 116 149 - -
Aev01g1133 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 116 149 IPR001680 GO:0005515
Aev01g1133 442 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Aev01g1133 442 Gene3D - 218 388 IPR015943 GO:0005515
Aev01g1133 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 304 IPR001680 GO:0005515
Aev01g1133 442 Pfam WD domain, G-beta repeat 166 203 IPR001680 GO:0005515
Aev01g1133 442 Pfam WD domain, G-beta repeat 112 148 IPR001680 GO:0005515
Aev01g1133 442 Pfam WD domain, G-beta repeat 262 295 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1133 Aev-Chr1 11827561 11833104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1133 88 306 U-box Gene Family AT2G33340 25.974 1.19e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1133 K14829 - gmx:100791195 678.707