Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1128 ATGGCGAGACGACAGACGGCGGTGGCTGCTTTACCCTCTCCCATTCCGTTTCAGCAACAACATCCAAGAACCAGAAGCTGCAATACCAACATCGGTGACCTCCTCTCCTCGGACGAGCTTCCCAGCGAGATAGCAGCGGCGGCGGCAAAGAGATTCAACCCAAAGTCGGAGCGATACAGGAAAGAACAGATCGAAAAAGGAGTGGGTGACACCGGTGGTTGTCGTAGACGTATTAGTCGGTCGGCTGGCAGTACGCGGCAGTCGAAGGACTGTTCTGAGGTTGCGTTGAAACTTCGTGGAAAGCGTTTAGGTCAGGTATGCTTCGCTTTTTGTTTGAGTTGGGATAGTTCTGGTGATTCATTTTCTGAAGAGGACTCCGGTGATGATGATGATGCTTTAACTGGAGGTGAGTCATTCGGTAGTGAGTCTTTTGGGGGTTTGTCAAGTGATTCCAGAAGATGTGTGCCACAAAGTTTGAATGGGTTTTTTGATAAGTACTTAGAGGATGAGGATGGTGATTTAAGTCCACCTACTGCTGCTGATTTTGTGGGTAAAGAGTTCAAAACTCTTGATGATGCCTACAAGTTTTATATGGTTTATGCGAGAAGTATGGGTTTTGGCGTTAGGAAGGGTGATATGGGGCGCAGCAAAGGGAGGGTAGTGACAAGGCGAACATTTGTTTGTTGTAAAGAAGGGTTAAGAAGAAAAAAATGGTATGTACGAGATGATCGACAGAGGAAGCCAAGAGCTGAGACACGAAGTAATTGTAAGGCTCGACTTTTGCTGAACTTGATGAATGGAGGTTGTACATGGAAGGTCAGAAAGTTAGTTGAAGAACATAATCATCCACTTACCCCAACCAAATATGTACACTTGATAAGGTCTCATCGGCGAATAAACACAGCTCAAGAGGCGCAAATTGAGACAATGCAGCGACACGGCATGAAAACCACCCAAATAATGGGTTTCATGGCAGGACATGGTAAAGGCTTTGGTGATGTTGGTTTCTCGAGGAAAGATTTGTATAACTACATCGACAAGTTAAGGCGGGGGAAAATAGTCGACGGTGATGCTGCAGCAGCACTAAGCTATTTGGAAGGTAGAGCTGACGGTGATCGAATGACTCTTGCAAGGTACACTGTAATTGAGGATGATAGGCTTGGCTTCCACACAACCTCTAGGTGTGAGGCGATAAATAGCTTTATCAACAAGTTTATAAAGTGCAAGTACAGCATGTTAGAGCTTGTGCAGAGCCTAGAGCGTGTAGTGAATGAATATAGAAACAATGAGTTAGAATCTCAATTCAAATCAGTGTACACTTTTCCAGTATATGACACAGGAATGCGAAGTCTTGAGGAACATGCTGCCAGTGTGTACACTAGGGCAGTATTTTTGGATGTCAAGGAAGAAATTTTGAAGGCATCATCGCTGGTCTGTGTTAGTCGAGAGAGCTTTAGCACCACGGTTAAATTCCAGTTGTGTAAATTTGGCTGCCCCAACAGGTTGTATGAGGTTTTATTTGATAGACTTGGTGGGGATAATGGCCCCACAATTAAATGTGACTGCTACCTTTTTAGTACGAATGGTATCCCCTGTTGTCATGTGTTCTTTGTGATGAAGGAAGAGCACGTTCCAGAGCTCCCGTACAACTTGGTTTTACCGAGGTGGCGCAAAGACGCGAAGGCTTTTGAGGATCGTGATGGGAAGGATGATGATGACGATCACTCGAAGCAAAGAAGGGAGATATTACGTTATGGCTCATTGTCGTCGGCAAGCTTGTGGATGTCCTACCTTGCATCAAAATCGGCCCCACATTTCAGGCGAACTATGGACGCAGTACTATTCATAACAAATGAGTTGGAGGGGAAGTGTGCAATTGGTGAAAAAGGTACTGCTGAGGTTTTGTCAAAGAAAATTGGTGACCCGTTGGTGGTGAAGACTAAGGGAGCACCACGAAAAAGTAGGGTCAATTCAACTAAGAGGGTTTGCTCAAATTGTTCTCTACCTGGTCATACTAAAAGGACCTGTACCCGTCCAACTATTGACTCAGTCGAAGGCTCTGTAGACACCAATTCTTTATGTGGGAGTAGCTGGCCATTTCAGACCGAGACAGAGGGGTTCAACAGTCAAGAAGAGACGTGTGTCGGCGGAAACACAGGTGCGGGTGAAAGTTCTATGCATGTGCATCAACAGACGCCGTTTTGTCAAACTGGGATATCGAAGCAGATGTTTTTCGGAGGCCAAAATGTTTACCAGTACTTGACACCCGCAACACTGCCTGCAACACTGGGCAGGGGTGGTGAAAACAATGGTTCTCACGAGGGGTTGGTTGGAGATGTTGGTAATGGTGTGGACTTTCAAGGTGTGAACGGATGGGGGAGTGAAAATGTGTATCAGGACTCGATGAGTAAGGAATGCACTAAGAAGTGA 2430 0.4576 MARRQTAVAALPSPIPFQQQHPRTRSCNTNIGDLLSSDELPSEIAAAAAKRFNPKSERYRKEQIEKGVGDTGGCRRRISRSAGSTRQSKDCSEVALKLRGKRLGQVCFAFCLSWDSSGDSFSEEDSGDDDDALTGGESFGSESFGGLSSDSRRCVPQSLNGFFDKYLEDEDGDLSPPTAADFVGKEFKTLDDAYKFYMVYARSMGFGVRKGDMGRSKGRVVTRRTFVCCKEGLRRKKWYVRDDRQRKPRAETRSNCKARLLLNLMNGGCTWKVRKLVEEHNHPLTPTKYVHLIRSHRRINTAQEAQIETMQRHGMKTTQIMGFMAGHGKGFGDVGFSRKDLYNYIDKLRRGKIVDGDAAAALSYLEGRADGDRMTLARYTVIEDDRLGFHTTSRCEAINSFINKFIKCKYSMLELVQSLERVVNEYRNNELESQFKSVYTFPVYDTGMRSLEEHAASVYTRAVFLDVKEEILKASSLVCVSRESFSTTVKFQLCKFGCPNRLYEVLFDRLGGDNGPTIKCDCYLFSTNGIPCCHVFFVMKEEHVPELPYNLVLPRWRKDAKAFEDRDGKDDDDDHSKQRREILRYGSLSSASLWMSYLASKSAPHFRRTMDAVLFITNELEGKCAIGEKGTAEVLSKKIGDPLVVKTKGAPRKSRVNSTKRVCSNCSLPGHTKRTCTRPTIDSVEGSVDTNSLCGSSWPFQTETEGFNSQEETCVGGNTGAGESSMHVHQQTPFCQTGISKQMFFGGQNVYQYLTPATLPATLGRGGENNGSHEGLVGDVGNGVDFQGVNGWGSENVYQDSMSKECTKK* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1128 809 ProSiteProfiles Zinc finger SWIM-type profile. 503 543 IPR007527 GO:0008270
Aev01g1128 809 PANTHER OS02G0262500 PROTEIN 180 384 - -
Aev01g1128 809 Pfam FAR1 DNA-binding domain 195 285 IPR004330 -
Aev01g1128 809 PANTHER OS02G0262500 PROTEIN 378 673 - -
Aev01g1128 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 378 673 IPR031052 GO:0006355
Aev01g1128 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 180 384 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1128 Aev-Chr1 11794170 11798848 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev01g1128 FAR1 2.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1128 - - adu:107478967 287.73