Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1114 ATGTCCGTACAATCAACCCTTAAGCTTCGGAATCTCACGATTTCAACAGCAAGGTCCGATTTTGAAGGTGACCCACCATGCAAAACCATAAAAAAGCTTCAACCCACGAAGAAGCTCCTGAGAATCATACTCACAGATCACGACGCTACCGATTCAGACACTTCAGAAGAAGATGAAGAAAAAAACCCACCAAGGGTAAAAAGGGAAATCATCACCCACCACATGAACAGCACCAAGTACCTTCCTTTCTCGCACTCTCCGTCATCAATTTCTTCGCCATCTTCTACTTCAACTGGGTCGGGTCGTGACCTGAAAAATTTTAACCGGTTCAAGAGACCTGTGAAGCGATCGGTTTCGAGCTCCGCCGCTCGCCGCCGTGGCGGGAGGTTTCGTGGGGTTAGACAGAGGCCGTGGGGAAGGTGGACGGCGGAGATCCGAGACCCGACTCGACGGAAACGACTCTGGTTGGGGACTTTCGACACGGCGGAGGAGGCCGCCGCCGTGTACGACGCCGCAGCGGTGAAGTTTAAGGGTCCCGCCGCCGTCACCAACTTCCCCCATGCCGTTGCTGTGGTTTCCAGCGACAGTACTGCGGCGTTTTCCGGCGACAGTTTTGCTTCGGTTTCCGGCGACAGTTTTGTGGCGGTTTCCTGTGATAGTTTCGCCGGGATTCCCGGTGACGGTTTTGCGTCCCCGACGTCTGTTTTGGCTTACGGTGACGGTGGTGGAGAGTCGACGCCGTTTGAGGATCTCCGTTACGGTGACGTTGATGCCTTTGGGTTTGGTATCGACGAGCCGTTTAGCTTGACGGACGTTAACTCGGTGCTACTGAGTCAGCAGCGGTTTGGGAAAGAAGAGTTTGGGCAGCTTCCTGCATCCACCGTAACCCCCTTTGTATCTTGGTTTTCTCAACGAGACCTTTCAATCTCCACCATCGTAACCCCCATTTGCATCTCCACCACTGTAATCCCAACCTCCTACAACTCTATTCACAATCCATCCAAACAAGAGAAGCTTCGTGCCTCAACAAAGTGGCGTCTTGACTTGCTCAACGAGGAAGCTTCAAGGAGACCTAATCGATCAGCTACAATTGAGGACAACATTTCTGATATGAATAACCTTAAAGGGAGTCACAAGGTGCTCAAGGAAGAGAAGGAAACCCTGACTTTCGAGAATGAGCCTCTAACTTCCAAAAAGAAGAAGTCAGATGCTAAGAGGATCTTTAAGATAAAGGGGATGATGCAAGAGGTGAAGGACCTTATGCTAAGGAGCGTTGATGGCATCGCTGAATGCATCATGGCTCAGTCACCCACACAGTCCCACACCACCACACCAAACCTCATCGGGCCTCGTCACACCGACATCGCTCTCACTTCCCTTGGCCCTTGTCGCCCTCGGCCCCTCCACCCTCGAGCTTATCTCCCTCCGTTATCGGTTTCTCCACCCTCGGGCTCATCTCCCTTCGCCCTCGGCTTCTCCATCCTCGAGCTCATCTCTCTCGGCTACGACATCGTCTCTGTCAGCCTGGGCTTCATCTTCGTCTCCCTGGGTTTCATCTTTGTGGGCCTCGACCTTTTCTTCAATTTGGTTTCTACAATCATGGCAGATGAAGCACATAATGATCTGAAGGAGGAGGTTGCAGAAATTGCGCCATTTGATCCAACTAAGAAGAAGAAGAAAAAGAAAATTACAATTGTAGATCCTGCTGATGATGACTCAGTGGACAAGTTGGCTGAGAAGACTGAAAATCTGTCAGTTTCAGAGGGGGTTGAGAGTACATTTGCTGGTTTAAAGAAGAAGAAGAAGAAGGCTGTTGAAATCAGTAACTTAAATGATGAGGGTGGAGATGCAATTGAAGATTTGGATGATCATGCTGAAGAAGATGAAGGAGATGCTGTTTCCCTGCAGCCTCGTTATCCTTGGGAAGGGAGCGACCGTGATTATGAATATGAGGAGCTTCTGGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGTGACCGGCGTAGGACTGTCATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATTTATGCAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCTTTGGATGGACAGCAGAGGTTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGGCGATATATCAATGAATATGTCATTTGCCTCGGATGCAAAAGTCCTGACACAATACTTTCTAAGGAGAACCGTCTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCCGTTGCTCCGATCAAGGCCGGTTTCGTTGCACGCGTTGGCCGTAGGAACGCTGGTACCTGA 2409 0.4977 MSVQSTLKLRNLTISTARSDFEGDPPCKTIKKLQPTKKLLRIILTDHDATDSDTSEEDEEKNPPRVKREIITHHMNSTKYLPFSHSPSSISSPSSTSTGSGRDLKNFNRFKRPVKRSVSSSAARRRGGRFRGVRQRPWGRWTAEIRDPTRRKRLWLGTFDTAEEAAAVYDAAAVKFKGPAAVTNFPHAVAVVSSDSTAAFSGDSFASVSGDSFVAVSCDSFAGIPGDGFASPTSVLAYGDGGGESTPFEDLRYGDVDAFGFGIDEPFSLTDVNSVLLSQQRFGKEEFGQLPASTVTPFVSWFSQRDLSISTIVTPICISTTVIPTSYNSIHNPSKQEKLRASTKWRLDLLNEEASRRPNRSATIEDNISDMNNLKGSHKVLKEEKETLTFENEPLTSKKKKSDAKRIFKIKGMMQEVKDLMLRSVDGIAECIMAQSPTQSHTTTPNLIGPRHTDIALTSLGPCRPRPLHPRAYLPPLSVSPPSGSSPFALGFSILELISLGYDIVSVSLGFIFVSLGFIFVGLDLFFNLVSTIMADEAHNDLKEEVAEIAPFDPTKKKKKKKITIVDPADDDSVDKLAEKTENLSVSEGVESTFAGLKKKKKKAVEISNLNDEGGDAIEDLDDHAEEDEGDAVSLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1114 802 Gene3D - 645 787 - -
Aev01g1114 802 Gene3D AP2/ERF domain 128 188 IPR036955 GO:0003700|GO:0006355
Aev01g1114 802 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 534 802 IPR045196 GO:0003743|GO:0006413
Aev01g1114 802 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Aev01g1114 802 MobiDBLite consensus disorder prediction 80 104 - -
Aev01g1114 802 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Aev01g1114 802 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Aev01g1114 802 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Aev01g1114 802 SMART eIF2Bneu4 672 781 IPR002735 GO:0003743|GO:0006413
Aev01g1114 802 CDD AP2 137 188 IPR001471 GO:0003700|GO:0006355
Aev01g1114 802 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 751 786 IPR016190 GO:0003743|GO:0006413
Aev01g1114 802 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 647 754 IPR016189 GO:0003743|GO:0006413
Aev01g1114 802 MobiDBLite consensus disorder prediction 80 130 - -
Aev01g1114 802 SUPERFAMILY DNA-binding domain 129 187 IPR016177 GO:0003677
Aev01g1114 802 Pfam Domain found in IF2B/IF5 672 780 IPR002735 GO:0003743|GO:0006413
Aev01g1114 802 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Aev01g1114 802 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 534 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1114 Aev-Chr1 11601468 11626387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1114 534 798 Eukaryotic Initiation Factors Gene Family AT5G20920 76.779 4.23e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g1114 eIF-5_eIF-2B 2.6e-38 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1114 K03238 - gmx:100783618 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1114 01 11601468 11626387 Aev01g1114 01 11601468 11626387 ECH
Aev01g1114 01 11601468 11626387 Aev07g2220 07 23175827 23176717 PCT