Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1037 ATGACTCTTGTTGTTGATTGTGTTGGTAAGATTTGTGCTGGTATTGAAGTGTCTAGGCTTAGGATAAAGGTGATAAGGTTGTGGACTGTTCCTTTTTTTTCAAGCTCTTCTACACCTGGATCAATTGAAATGGTTTTACTTGATCAGAATAATGGAGGGATTCAAGCAACTATCAGGAAAACGTTGATCAGTAAGTTTATTGATCAAGTTTGTGAAGGCCAGACATATGTTTTTTCCAACTTCAATGTTGTCCCCAACATTGGAACATATCGAGCTTCAGATCATCAGTTTAAGTTGGTGTTTACCTTTAGGATTCTTGTGTCCTCAACTGTGATGCAATCCATTCCAATGTATGGCATTTCAGCCATTCCTTTCAACAAGATACTTTCAACACAAGACGAATTTGATTTTCTAATTGATGTTGTTGGGATCGTGACTGCTGTTGGTCTTGTGAAGGAATATGCCCGTGAAGGAAAGACCTCTAAGTTGATTGTTATTGAACTAAATGCAGAGAACCTGCAATTGGAACTAACTTTGTTTGATGAGTATGTTGAGCATCTTCTGAAAATGGAACTAAAAAGTGAACTAAAGCTTCCTATTTTAGTTATTCAACTCGCAAAAGTTAGGATCTTCAGAGGCAAAGTTGGTGTGCAGAATGTGATGTTTGCTTCTAAATTAATGTTGAATCCTGATGATCATGAAATTAATCTTTTCAGGGATAGCATATTAACTGCTGGAAATGAAGGATCTAAGTTCTCCATTAAGATCAATGATTCTTCATCTGGGACTGTGGAAGATGACTTCTTGAAGTTAACCCCAAGGAGTTGTATTGACAAATTAACTGAGAATGAAGAGAGTGTTGAAGAATGTGAATACCCTATTGTTTTTAATGATCTCATTGGCAAAAAAATGTTGTTCAAGATTGAAACTAGGAAGGTTTCAAATAATAGATACTATGACACATTTAGAGTTAAGAAAGTGTGCAATGATTCTAATTTGATTGGTATGTTCGAACTTGAAGGATCCAATTTAACTCCTCTTAAGGATACCTTCACTCCTCTATTCAGCTGCACCGTTGATTTGACTTCAGACCTTGATTTTATTCCTTCCATCAGTGGTCTAAAAAATGTTCAAACTGAGAACCTTTCAAATGGTGTCATGACTTCTTACCCTTCTACTGATTGTGAGATACTTGGAACAAGTGACGTAATGGGTTTTACTCCTACCAGAAGGAGTTTAGCGGATGCTTTTGATGAAGTTGGTGGGTCGCAGAAGAAGGCCAAGATTATGCAAGATTCTGAAGAGGTGCACTAA 1314 0.3683 MTLVVDCVGKICAGIEVSRLRIKVIRLWTVPFFSSSSTPGSIEMVLLDQNNGGIQATIRKTLISKFIDQVCEGQTYVFSNFNVVPNIGTYRASDHQFKLVFTFRILVSSTVMQSIPMYGISAIPFNKILSTQDEFDFLIDVVGIVTAVGLVKEYAREGKTSKLIVIELNAENLQLELTLFDEYVEHLLKMELKSELKLPILVIQLAKVRIFRGKVGVQNVMFASKLMLNPDDHEINLFRDSILTAGNEGSKFSIKINDSSSGTVEDDFLKLTPRSCIDKLTENEESVEECEYPIVFNDLIGKKMLFKIETRKVSNNRYYDTFRVKKVCNDSNLIGMFELEGSNLTPLKDTFTPLFSCTVDLTSDLDFIPSISGLKNVQTENLSNGVMTSYPSTDCEILGTSDVMGFTPTRRSLADAFDEVGGSQKKAKIMQDSEEVH* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1037 437 PANTHER REPLICATION FACTOR A 1, RFA1 22 308 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev01g1037 437 SUPERFAMILY Nucleic acid-binding proteins 121 242 IPR012340 -
Aev01g1037 437 Gene3D - 114 253 IPR012340 -
Aev01g1037 437 Pfam Domain of unknown function DUF223 43 116 IPR003871 -
Aev01g1037 437 CDD RPA1_DBD_A_like 19 102 - -
Aev01g1037 437 SUPERFAMILY Nucleic acid-binding proteins 14 104 IPR012340 -
Aev01g1037 437 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 22 308 - -
Aev01g1037 437 CDD RPA1_DBD_B_like 140 241 - -
Aev01g1037 437 Gene3D - 8 110 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1037 Aev-Chr1 10501034 10503583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1037 46 270 Core DNA Replication Machinery Family AT2G06510 24.569 5.33e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1037 - - aip:110271971 241.891