Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1033 ATGACCTCTCCTCCGCCGCCGCCGACTCAATCCCCTTCCCCCGCAGTCGCCTCCGCCGTCGACTCCATCCGCAGCTCCCTCTCCTCCCTCTCCGCCGAACCTCGGCCCGACCACCACAACCACCGCCGCCGCCATTTCGACAATCCCCGCAGATTTTCCGCCTTCGCCCGCCGCCTCCACGTCATCCTCGACCAGCTCCTCATCTTCCTCCCGCCGCACACGGCGCCGCCGCCAGTTCTGACGGCGCTGAAGGGGATCTCCGGCGAGCTATCTAAGGCGGAAGAAACGGTATCATTGTACGAGAACGCGAGCAAGATCTTCGTGCTGATGAACTGTAAGACGCTGTGCTCGTCGCTTCAAGAGCGAAGTGTTGGGATTGCAGGGTGGCTTGCGTTGCTGGAATCGGGTATTGAGGAGTTCCCTGAGCTGCGAAAGAAAGTTTCAGATCTCTGCAGAGACATGAAGCTTGCAAACTTCACGGTTACAGAGAACGAAGAGAGGGTGCGGTGCACCTTGGAGAAGGAAGGGGAAGGGAGAGAGACAAGCAAAGCAGTGCAGAGTGCTATTGTAATGGATTTGGCTCGTGCTTTTGGGGTTGAACCTGATGATCATGCTGAGTTCTGTAACCAGGTGAACCTCTTCAAAAATGATGCCTTGCGCTCCAACTCTGTGCCGGAGAGAAGGATTTTGATTTCTCTGGAGAGGATTCTGAAAAACTGGTTTGTTGAGCCTGCCTTTTTGACCCAGAACATGGATTTTGATGTTGAGGATGATGCTGCTGCTAATGCTTCCATTTTGCCCTTTAAGAATTTCCTTTGCCCCTTGACCAAGGAAGTGATGAAGGATCCAGTGGTGGTCCTGGAGTCTTCTCAGACCTACGAGAGGACTGCTGTTGAGTACTGGTTTGAGAGGTGCATTGAGGATGGCTATGACCCCACTTGTCCTGTCACTGGAATCGCCCTTAAGTCCTTGGAGCTGAAGCCCAATATTGGCTTGGCAGGTGCAATTGAAGAGTGGATTGGTAGGGTTGTTGAGTATCAAGCCACATCTGCTGTGCATCATCTGATTGAGGAGCCGTTGTCTGTTGAACGCGTTGAGCGAGCTCTGGATAATGTTTATAAGGTTTCTGAAGAGCATCCTACTCGCAGATATATAATCAGGAATGCTGGCATCGTGCTGTTGATAGTGACTGTGCTTAGTAATAGCTCTAAAACTATTGGATCGCGGTTGAGAAGCAAAGCTCTAATGACTTTACTTAGCATGGCTAAGGATGAAGAAAGCAGGAAAATAATGCTTGAACGGGGTATCCCTAGATTGGCTGTGCATAGTCTTATTGGGAACTCTGAGAAAGAGAGAGAGTATGCTGTCAAGTTATTATTAGAATTCTGCAGTGATGAAGATTGTTGCATAAGAATTGCAGCAGAGAAAGGTGCATTAGTTCTTCTGTCAAGTATGGCAGGAAATCTGGCATATCCGTCTTTGTCTAATTTAGCTGAGGAAGTCTTGAGGAAGATGGAGATGGTGGATGACAATGTTCAATGTTTGGCTGCAGCTGGACGATTTGATCCATTACTTTCACGACTACGTGATGGTTCTGATGGTGTTAAGATAGAGATGGCCTCTCTCGTGGGAAGGATGACCTTGACAAATAGCTGCAAAGAACAAATCGCTAGGCATAGTGCCAAAGTATTTGTCGACTTGCTGTCTAATCTAGAAGGAAGGGGACCAAGTTTGCAAGCATTATATAACTTGTCAGGATTGGATGACAATGCAGCCATCCTTGTTGAGTCTTCAGTCCTACCATCTCTTATAGAAGTTCTTTTTGACGAGCAGGATCCTTCATGTGAGTTGAAGTCATTAGCTGCTTCAACAATAGCGAATATAGTATCAAAGCCAGGCAATTGGGAATTAGCATCTGCTGACAAGAAGGGAAATCCAATGCAGTCAGAAAATATTGTTTTCAGATTTTTGGGCCTTTTGAACAGTGTGTCCTCGCAATGTCAAGTGACCATCCTTCGCATTCTCTGTGGAATTACATCATCTCCTCAAGCATCAGAGTTGGTTGCCATGCATATCATGTCTGGGGGTGGCTACAGAATGGTCGCACCCTTTCTTCAACACTCAGAAGTTGAACACAGAAGATTTGCTTTTAAGCTTACCAGACAGCTCTCTCAATGGTGCAGTCAAGATCTTGCAAATGAGTTGAGGGTTTCAAACATGCTTACCATAATTAAAGATAAACTATTGGATGACCAATCAACAAATGATGAGAGATCAGAAGCAGCACAGGTACTTGCCAACTTTTCCCTCTCAGAAGATGAAGTAAAGACACTTCTAGGAGGCGATTTTGTGGAATGGATTGTTGGTACTCTTAAGAACCAGCAGCAAATGTCGAGTTCGAGGTTTTCACACACTGCATCAGGCATGCAGGAAGGTCTTCTAGGTCTCTTACTTCATTTTACTAGGAACCTTGATCAGCAGACTCTTAATTTAATAAGAGAAAATCGTCTCATGTCTGTTCTCTCTGAGCAGCTGGATTATACGTCGAAACCTAAGACAAAGTGTCTCGCTGCTGTTGGATTGAAAAACTTATCAGAACTTGGAAGTTCATTTAATGCTAGGGAGTCTGAACCAACACCTTCGAGCAGGTTCTGCTTCTTAGTGTTCATGTGTGGGAGAGCCTCTGCTCAACCTTCTACATGCCCTTTTCACAACAGCACCTGTGAGGAATATAAACAAGTGTGCCTTCTCAAGACCAACTGTATCAAGCCCCTGGTTGATCTCCTCAGTGACAACGACACTGGCGTCCAGCTTGCAGCCGTCGACGCACTTTCTACTCTAGTACTAGATTCCACGTCATGTAGCTTCAAAAGAGCTGTTGATGAGCTTGACCAACTCGGTGTGGTTGATGGTGTGATCAATATTTTCACAGAGGCTAGATCAGGGGAGCTTCAGGAGAAGACAATTTGGATGATAGAGAAGATATTGAGAGTGGAAAATCATAGCCATAAGCATGCACTTAATCAGTCTCTAGTGAGAGGCTTAGTTGAAGCCTTTAAGCATGGAAACACCAACACAAGGAAGCATGCTCAAGATGCTCTTACCCTCCTAAAACAGTTATCAGGTATTAGTGGAAAAGCATCAAGTCAATCTCAACCTCGAAGATAG 3168 0.464 MTSPPPPPTQSPSPAVASAVDSIRSSLSSLSAEPRPDHHNHRRRHFDNPRRFSAFARRLHVILDQLLIFLPPHTAPPPVLTALKGISGELSKAEETVSLYENASKIFVLMNCKTLCSSLQERSVGIAGWLALLESGIEEFPELRKKVSDLCRDMKLANFTVTENEERVRCTLEKEGEGRETSKAVQSAIVMDLARAFGVEPDDHAEFCNQVNLFKNDALRSNSVPERRILISLERILKNWFVEPAFLTQNMDFDVEDDAAANASILPFKNFLCPLTKEVMKDPVVVLESSQTYERTAVEYWFERCIEDGYDPTCPVTGIALKSLELKPNIGLAGAIEEWIGRVVEYQATSAVHHLIEEPLSVERVERALDNVYKVSEEHPTRRYIIRNAGIVLLIVTVLSNSSKTIGSRLRSKALMTLLSMAKDEESRKIMLERGIPRLAVHSLIGNSEKEREYAVKLLLEFCSDEDCCIRIAAEKGALVLLSSMAGNLAYPSLSNLAEEVLRKMEMVDDNVQCLAAAGRFDPLLSRLRDGSDGVKIEMASLVGRMTLTNSCKEQIARHSAKVFVDLLSNLEGRGPSLQALYNLSGLDDNAAILVESSVLPSLIEVLFDEQDPSCELKSLAASTIANIVSKPGNWELASADKKGNPMQSENIVFRFLGLLNSVSSQCQVTILRILCGITSSPQASELVAMHIMSGGGYRMVAPFLQHSEVEHRRFAFKLTRQLSQWCSQDLANELRVSNMLTIIKDKLLDDQSTNDERSEAAQVLANFSLSEDEVKTLLGGDFVEWIVGTLKNQQQMSSSRFSHTASGMQEGLLGLLLHFTRNLDQQTLNLIRENRLMSVLSEQLDYTSKPKTKCLAAVGLKNLSELGSSFNARESEPTPSSRFCFLVFMCGRASAQPSTCPFHNSTCEEYKQVCLLKTNCIKPLVDLLSDNDTGVQLAAVDALSTLVLDSTSCSFKRAVDELDQLGVVDGVINIFTEARSGELQEKTIWMIEKILRVENHSHKHALNQSLVRGLVEAFKHGNTNTRKHAQDALTLLKQLSGISGKASSQSQPRR* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1033 1055 Pfam Armadillo/beta-catenin-like repeat 916 947 IPR000225 GO:0005515
Aev01g1033 1055 SUPERFAMILY ARM repeat 366 559 IPR016024 -
Aev01g1033 1055 SUPERFAMILY ARM repeat 910 1039 IPR016024 -
Aev01g1033 1055 SUPERFAMILY RING/U-box 269 340 - -
Aev01g1033 1055 ProSiteProfiles U-box domain profile. 266 346 IPR003613 GO:0004842|GO:0016567
Aev01g1033 1055 SMART arm_5 379 423 IPR000225 GO:0005515
Aev01g1033 1055 SMART arm_5 825 866 IPR000225 GO:0005515
Aev01g1033 1055 SMART arm_5 908 949 IPR000225 GO:0005515
Aev01g1033 1055 SMART arm_5 587 630 IPR000225 GO:0005515
Aev01g1033 1055 SMART arm_5 424 464 IPR000225 GO:0005515
Aev01g1033 1055 SMART arm_5 549 586 IPR000225 GO:0005515
Aev01g1033 1055 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 12 1050 - -
Aev01g1033 1055 CDD RING-Ubox_PUB 271 318 IPR045210 -
Aev01g1033 1055 Gene3D - 904 1051 IPR011989 -
Aev01g1033 1055 SUPERFAMILY ARM repeat 506 867 IPR016024 -
Aev01g1033 1055 SMART Ubox_2 270 339 IPR003613 GO:0004842|GO:0016567
Aev01g1033 1055 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 342 IPR013083 -
Aev01g1033 1055 Gene3D - 344 869 IPR011989 -
Aev01g1033 1055 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 12 1050 - -
Aev01g1033 1055 MobiDBLite consensus disorder prediction 23 45 - -
Aev01g1033 1055 Pfam U-box domain 270 340 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1033 Aev-Chr1 10442553 10448955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1033 268 1044 U-box Gene Family AT1G20780 28.752 2.05e-84 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1033 - - gmx:102659945 1502.65