Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0998 ATGGCGGGTTTGTTCTCATTAGGAGGTGGTGGGAGAGGTAGCAGTAGTGGAAACCAAAACCCTCAACAAAATCATAACAACCAAAGTAGCGATATTATCTCTCATCCTGAAACTCTATTCTGGTACAATAAAAACGACGACGTTTCATCATACCGCGGCTTCGAGCTATGGAACCAGCACGCGCGCCCTCTTCTCCACCGAGATCTCTACTCCTCCGCGGCAGCGCTAGGTGTGGGTCCGAGCAGCTTTTCCGATGACCAGTCGTCGTCGCCGAGATCGGCGGCAGCGTTCATGGCGATGCGGTCCGCCGCGATGGCGGAAGTCGGAGGTGGAAGCAGCGGCGGCGGCGGAGGGATTAGCTGTCAAGACTGTGGGAACCAAGCGAAGAAGGATTGCCTTCATATTAGGTGCAGAACTTGCTGCAAGAGTCGCGGGTACCAGTGCCAGACTCATGTCAAGAGCACTTGGGTTCCCGCCGCCAAACGCCGCGAGCGCCACCACCAGCAGCAGCAGCTCGCGGCGTTGCAGGAAAGAGAGGTTTCCAAGAGACCTAATAAAGATCATAATATTGAAAACCCTTCCGTACCCACTTCTTCTTCTGCCCTCGCTTGCACTCGTTTGCCCTCCTCTTCAGAGCAAGGAAATTTTCCTTCAGTGGTGAGCTACCCTGCGGAATTCAGGTGCGTGAGGGTTAGCTCCATGGAGGATACGAATGACCAGTACGCATATCAAACCGCCGTGAACATCGGAGGCCATTTGTTCAAAGGGATTTTATATGACTATGGTCCTGACTCTGACATCGCCACCACAACTCAGCCGTTGGACCTCATCACCGCTGCCGCCGCCGCTACCACTTCCGCCGCAGTTGTCTCCTCCACTGGAACGCTCATAGATCCATCTTCCTTGTACAATCCAGCTCCACTTAACACCTTCATGGCTGGCAGTGGTACGCAATTCTTCCCTCACCCAAGATCTTAA 978 0.5389 MAGLFSLGGGGRGSSSGNQNPQQNHNNQSSDIISHPETLFWYNKNDDVSSYRGFELWNQHARPLLHRDLYSSAAALGVGPSSFSDDQSSSPRSAAAFMAMRSAAMAEVGGGSSGGGGGISCQDCGNQAKKDCLHIRCRTCCKSRGYQCQTHVKSTWVPAAKRRERHHQQQQLAALQEREVSKRPNKDHNIENPSVPTSSSALACTRLPSSSEQGNFPSVVSYPAEFRCVRVSSMEDTNDQYAYQTAVNIGGHLFKGILYDYGPDSDIATTTQPLDLITAAAAATTSAAVVSSTGTLIDPSSLYNPAPLNTFMAGSGTQFFPHPRS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0998 325 MobiDBLite consensus disorder prediction 165 201 - -
Aev01g0998 325 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 120 162 IPR006510 -
Aev01g0998 325 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 323 IPR007818 GO:0003700|GO:0006355
Aev01g0998 325 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 216 263 IPR006511 -
Aev01g0998 325 MobiDBLite consensus disorder prediction 1 31 - -
Aev01g0998 325 PANTHER PROTEIN SHORT INTERNODES 1 323 - -
Aev01g0998 325 MobiDBLite consensus disorder prediction 11 31 - -
Aev01g0998 325 Pfam Domain of unknown function (DUF702) 118 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0998 Aev-Chr1 9907035 9908846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0998 1 314 C2H2 Transcription Factor Family AT5G66350 45.739 6.44e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aev01g0998 DUF702 2.1e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0998 - - ahf:112720334 351.673