Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0955 ATGGGGGAGGATCAGCAGTTGGGAAATGAAGGGTGGACACTAGTCTCCAGGAAGAGAGTGACCCCTTTGCCAGTTCGAAACCAATGGAACAATAATGATCAAACATCAACAAGATTGGAGAATAAGAGGGTGAAACTTGTTGAAAGAAGGACTCATACGGTGTTTGTCGATGGACTTGAAGAATCCACATCCAAAGGTCAGCTCCGATATGCCTTTGGTTGGAGTGGGTGGATAGTTGACATTTTCATTTCAAGGAAAAAGAGAAAAGGGAGAAAGGATTGTTTCGCCTTCATCCAGTTTGAAGATAAGGGTGGCGCTATGAGGGCGGTTGAAAGAATGAATGGTGCAATTGTGAACGGTATAAGAGTTCTAGTCAAAGAAGAGAGTTATAACAGGAGGCTAGAAAATAATAGTTCTAATCACAAGGAACCCTTGCAAGTTAGGAAGCTAGGGCTGAATGTGACTTCTCAGGAACTGATCTGGGTTCCGATGGACAACTTAGAGAGGGTGGTAACTATGGACTCAAAACCTTGCCTTCTCAAAGAAGTATGTGTTGAGTCCTGTAAAGATCAGTCGCCGGCGGTGTGGTGTGGCTCAAGAAGAGTCTGGCTTGAAGTAATGGGCATTCCTGTTCATGCATGGGACAAGGACTCTCTACTAAAAGTAGGGAATCTGTGGGGTGAGACTTTGATGTTGGATCCTGATACAGAGAATGGGAAGTTATTCAGTGTTGCAAGAATCCTTATTGATACATATCAAAGGAATCCGATATGTGAGGATATCTGCGTGAAATGCGACGAAATTCCCTATAGGTCTCATCTTAAGGAGGTTGGACAGGATATATATGGAATCCAATGCTTCTCTATTGAAGCATGCAAGGATGGAAGTATGGACGGAGTTGAGGTGCTGAGTGAAACTAGTGATGACCAAGGTCCAAAAATGAATGCTCCGGTGGTCGGAGATGGAAAGTCACTGACGAGCTAA 984 0.44 MGEDQQLGNEGWTLVSRKRVTPLPVRNQWNNNDQTSTRLENKRVKLVERRTHTVFVDGLEESTSKGQLRYAFGWSGWIVDIFISRKKRKGRKDCFAFIQFEDKGGAMRAVERMNGAIVNGIRVLVKEESYNRRLENNSSNHKEPLQVRKLGLNVTSQELIWVPMDNLERVVTMDSKPCLLKEVCVESCKDQSPAVWCGSRRVWLEVMGIPVHAWDKDSLLKVGNLWGETLMLDPDTENGKLFSVARILIDTYQRNPICEDICVKCDEIPYRSHLKEVGQDIYGIQCFSIEACKDGSMDGVEVLSETSDDQGPKMNAPVVGDGKSLTS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0955 327 SUPERFAMILY RNA-binding domain, RBD 47 127 IPR035979 GO:0003676
Aev01g0955 327 MobiDBLite consensus disorder prediction 302 327 - -
Aev01g0955 327 CDD RRM_SF 54 126 - -
Aev01g0955 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 120 IPR000504 GO:0003723
Aev01g0955 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 130 IPR000504 GO:0003723
Aev01g0955 327 Pfam Domain of unknown function (DUF4283) 200 249 IPR025558 -
Aev01g0955 327 SMART rrm1_1 53 126 IPR000504 GO:0003723
Aev01g0955 327 Gene3D - 25 159 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0955 Aev-Chr1 9457696 9458910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0955 38 115 Eukaryotic Initiation Factors Gene Family AT2G23350 33.333 2.10e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0955 - K25101 ahf:112794598 86.6557