Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0899 ATGCTCATGCGCGTTCAGAGAAACATAAGCATGGTTGTTTCTACCCTTTCAAGTTCTGAATCATCAATAGGAGAAGAACAAACAGAGGCCAATAATTCACAAAACAGGCCTTGTTTTCTGACAAGGGTAGCTATAAGAATTTCGAGAGCAAGATGGTTCAGTTTTCTGAGAAGAGTATTCCAATACCAGAATGGAATAGGGTCTGATATTGGATCAAACCCTTTCAATTCAAGCACATGGATGGTGATGGAGTTGATTGCATTGGTTGTTCAGATAACAAGCACAACATTGACTTTGGCAATTTCAAAAAGTGAGAGGCCAATTTGGCCTATGAGGATTTGGATTGTAGGGTATGATATTGGATGTGCCCTTAATTTGTTGCTACTTTGTGGCAGATACCATCAAATTCATATGACCCATCAGGGAGATGCTATTAGTCTTTCTGAAATGGAGCAGCACAGAAACAATGAAGAAACCAGGAACTCACATTTGATGCAAAATTGCCGAAGTTCACTAGAGCTTTTCTTTGCAATGTGGTTTGTGATGGGCAATGTTTGGGCCTTTGACTCACGTTTTGGATCATTCCAACAAGCACCAAAACTCAATGTGCTATGCATAATCCTTCTTGCTTGGAATGCAATATGCTACTCTTTCCCTTTTCTCTTGTTTTTGTTGCTTTGTTGTTGTGTGCCTCTAATTAGCACCCTCCTTGGATACAACATGAACTTGGGGTCCACTGCTAGAGGTGCTTCCGATGATCAAATTTCACAGCTTCCTAGTTGGACATATAAACAAGTTCATCAAAAGTTGTTAGAAAATGGCAATGACTCTGATGAATGCAGTGAAAGATTTATCAATGAGGATCCAGAATGTTGCATTTGCTTGGCTAAGTACAAAGACAAAGAAGAAGTTAGGGAATTGGCCTGTTCCCATATGTTCCACCGAAAATGTGTGGATCATTGGCTAACAATTATATCATGCTGCCCTCTTTGTAAACAAGGATTACAAAGGTAG 1014 0.3974 MLMRVQRNISMVVSTLSSSESSIGEEQTEANNSQNRPCFLTRVAIRISRARWFSFLRRVFQYQNGIGSDIGSNPFNSSTWMVMELIALVVQITSTTLTLAISKSERPIWPMRIWIVGYDIGCALNLLLLCGRYHQIHMTHQGDAISLSEMEQHRNNEETRNSHLMQNCRSSLELFFAMWFVMGNVWAFDSRFGSFQQAPKLNVLCIILLAWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNLGSTARGASDDQISQLPSWTYKQVHQKLLENGNDSDECSERFINEDPECCICLAKYKDKEEVRELACSHMFHRKCVDHWLTIISCCPLCKQGLQR* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0899 337 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 336 - -
Aev01g0899 337 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 336 - -
Aev01g0899 337 ProSiteProfiles Zinc finger RING-type profile. 291 332 IPR001841 -
Aev01g0899 337 SUPERFAMILY RING/U-box 282 335 - -
Aev01g0899 337 Coils Coil 147 167 - -
Aev01g0899 337 SMART ring_2 291 331 IPR001841 -
Aev01g0899 337 Pfam Ring finger domain 290 332 IPR001841 -
Aev01g0899 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 336 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0899 Aev-Chr1 8755852 8761188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0899 39 335 C3H Transcription Factor Family AT4G26580 66.555 1.22e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0899 - - gmx:100818715 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0899 01 8755852 8761188 Aev01g0899 01 8755852 8761188 ECH