Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0869 ATGTCATACTCCAGGAGGTCAAGGTATTCTCCTTCTCCATCCCCATATTACAAGCGGTACAGTAGGTCTGTGTCCAGATCTCTTTCAAGGTGTAGATCCAGAAGCCAATCAAGGAGTGTTTCAAGTGATGCAGAAAACCCAGGAAATAACTTGTATGTGACAGGATTGTCTCCTAGGATCACCAAGAGAGAATTGGAGAAGCATTTTGCAGCTGAGGGAAAAGTGGTAGATGTCCATCTTGTTGTTGATCCAAGGACAAGGGAATCCCGTGGGTTTGGTTTTGTGACGATGGAGACTCTCGAAGATGCTGATCGGTGTGTGAAGTATCTGAACCGTTCTGTACTTGAAGGGCGCATCATCATGGTGGAGAAGGCTAGAAGACGACGCGGTCGAACCCCAACACCTGGGAAGTATCTGGGGCTTAGGACTGTTCGATCACGCTACCGATCTCCAAGCTACTCTCCTCGCCGCTCTCCTAGTTATTCTCCCTACAGAAGAAGCTATAGTAGTTTAGCATATTCTTCAGATCGCAGCAGGAGTCGATCTTTTTCTCCTGACTACCGTCGAAGGAGGTCATACACTTCATACTACAGTCGCAGGTCATATTCCCCGTACTATGAACAACGCAGGTCGTATTGCCGATATGAACGTGGGTCGTATTCTCGTTGCAATCGAGGGGGGTCATATTCTCGTTACGATCGACGTCGACACAGATCCTATTCTCACTCTCGATCCCCATACAGCAGGTCACCTGTCAGTTACCGATCATTCTCTCCCTATGACTCACCTGATTATCAAAACTACAGAAGACACAGGAGCAGAGTAATTGCTAGCTGTTATGAAATGGAGCAAGGTTTGAAGATCTGGAGGGGTGTAGCACCTCCAAGAGCGGAGCTAACTGCCTGGGCTGAGGAATTCCCCTTTGATAGCAATGCTCTAATATCAGATCTGTGGAGTTGCAGAGTTTGGCTGAAAAATAAGTCAAAGAAGATGTGCTGA 999 0.4725 MSYSRRSRYSPSPSPYYKRYSRSVSRSLSRCRSRSQSRSVSSDAENPGNNLYVTGLSPRITKRELEKHFAAEGKVVDVHLVVDPRTRESRGFGFVTMETLEDADRCVKYLNRSVLEGRIIMVEKARRRRGRTPTPGKYLGLRTVRSRYRSPSYSPRRSPSYSPYRRSYSSLAYSSDRSRSRSFSPDYRRRRSYTSYYSRRSYSPYYEQRRSYCRYERGSYSRCNRGGSYSRYDRRRHRSYSHSRSPYSRSPVSYRSFSPYDSPDYQNYRRHRSRVIASCYEMEQGLKIWRGVAPPRAELTAWAEEFPFDSNALISDLWSCRVWLKNKSKKMC* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0869 332 CDD RRM_RBMX_like 48 125 - -
Aev01g0869 332 MobiDBLite consensus disorder prediction 146 189 - -
Aev01g0869 332 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Aev01g0869 332 Gene3D - 4 133 IPR012677 -
Aev01g0869 332 PANTHER TRANSFORMER-2-RELATED 8 210 - -
Aev01g0869 332 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SR45A-LIKE ISOFORM X1 8 210 - -
Aev01g0869 332 MobiDBLite consensus disorder prediction 147 180 - -
Aev01g0869 332 SUPERFAMILY RNA-binding domain, RBD 33 138 IPR035979 GO:0003676
Aev01g0869 332 MobiDBLite consensus disorder prediction 1 49 - -
Aev01g0869 332 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 120 IPR000504 GO:0003723
Aev01g0869 332 SMART rrm1_1 50 123 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0869 Aev-Chr1 8475644 8482194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0869 50 175 Eukaryotic Initiation Factors Gene Family AT2G36660 29.688 7.16e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0869 - - gmx:100808038 229.95