Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0853 AATGCAGAGTTTACAACTGTTGATGAATGTTATGAGATGTATGTTCAGTATGCAAGATGTGTTGGTTTTGGTGTGCGGAAGGGAGATGTTCATCGTGATGACTACGGGAATTTGACGAGTCGTAGATTTTTCTGTAATAGGGCAGGAAAGAGGGATGCAAGGTATCATGGAAGGATGAATAGGAAGAGGGAGCACAAACCCGAGACGAGGACAAATTGCGAGGCAAAGGTTACCGTTTACCGTGACAAAGGGAGTGGCAGTTGGAAAGTGAGGAAGTTGGTTGAAGAGCACAACCATGAACTGACACCATTGACATTTATCCACTCAATCCCAAATCGTAGACAAATTAAAGATTCGGACAAGGCACAAATTGATAGTAAGCACAAAAGTGGGATAGCAACATCTCAAATCACGGGGTTTTTGGCTGGCCAAGTTGGTGTAGGATTTTCCATGAAAGACTTGTACAATTACATTGATAAGAATAGGCGTGCCAAGATAGTTGATGGGGATGCCAATGCAACTATTAGTTATTTAGAAGGAAAGGCTGATTCTGAACCAATGGCCGTCGCAAAGTATAGTCTCACAGATGATAACAGACTTGGTAACTTGTTTTGGGCAGATGGGTTGAGTCGAGTTGATTATCAGTACTTTGGGGATGTTGTGGCTTTTGATTCAACCTGCAAAAAGAATAAGTACAATAAGCCATTGTTTATTCTTTCTGGCACCAACCACAACCGTCAAACTTGCATATTTGGTTTTGCTTTGCTTGAGGATGAATGTGCAGGAACTTATAAATGGTTGTTGGAGAATTTTTTAGAGGTCATGATGGGCAAAGCGCCAAGTGTTCTTGTAACTGATGGTGATAGGGCTATAAATGATGCAATCAAGGTAACCTTCCCAAATGCTACACATCGTCTTTGTGCTTGGCATTTGCAGAAAAATGCAACTTCTAACATCAAAAGTCAGGGATTTTGTGAGGCGTTCAAGTCATGCATTTATGCTAATTGTGATATTGATGATTTTGAGAAGAGTTGGCATGAAATTGTAGAAAGGTTTGAGTTACAAGATAATGAGTGGGTGAAGAAAGTATATGAAATGAAAGAGATGTGGGCCACTGCATACCTACGAGATAAATTTTGTGCTGGGTTTATAACGACTTCAATATGTGAAGGAATAAATTCCTTTATCAAAAGATTTTTAAAGTCTAGGCACAATATACTTGAGTTAGTACAAAATCTTGAGCGTGCAGTCTGGGTTTACAGGAACAATGAATTGGATGCTCAGTTCAAGTCAATTAATGGTGAGCCTGTGGTGATGACAGGGCTAGATCCGATAGAGCGTTCAGCCGCCAATGTGTATACGAGAGAGATATTCAAAGATGTTTTGAAACAAATTGATGGTGCGGGTGCAGTATTTGTCACTAGCTGTGAGAATGTTGGAGCCACTGTTGTTTACAAAGTGGCAAGGTATGGGAAACCAAATCACGAGTATACTGTGTTGAAGGACATGAATTTATACAAATATGAATGTACATGTAATATGTGGAATGGTTATGGAATTCCTTGTAGCCATCTTTTTTGTGTAATGAAGTATGAACATGTTACAGAACTTCCACCCTCATTGATCTTGAGAAGATGGTGCAAGGATGCAAAAAGTTATGAGGAGGTTTCCAATGTTGGGGAAGAGGACAGTGACAAAGCTTTCTTGCTGCGTTATGGTGCATTAAGTGCTGCTAGCCGGTGGATGTCATACCTTGGAGCAAGGAAGTTACCTTACTTTCGTCACACAATGGAAGGAATTTCTAGAATATCATCAGGCTTGGAACATAAATGCGGATTGGCGCATGGTGGTGAACCTGTTGAAAATGACGAAAAAATAGACGATCCAGTGGTGGCAAAGACAAATGGTGCTCCAACAGCTATGAAGGATAGGTCCAAAAAGCGGCTTTGCTCTAGTTGTTTATTGGTGGGTCATACTAAGAGGACGTGTCCGAAGTTGATATGTGGAAAGTCTCCATTTGATGAAGATGATTATGACCTTCCTTCGGGATCTTATGATGATTTAGACTCCAATGATGGGGCAAATCTTGAGGGTCATGAGGATGTTGCAGAGTCAGGTAGGTCAAAGACTGATTTAAATGCTTGTGAAGACACATCAACAGGTCCTACTGAAGGATATTTGAGACATGAATTTAATAATGTTCAATGTAATCAATGA 2217 0.4037 NAEFTTVDECYEMYVQYARCVGFGVRKGDVHRDDYGNLTSRRFFCNRAGKRDARYHGRMNRKREHKPETRTNCEAKVTVYRDKGSGSWKVRKLVEEHNHELTPLTFIHSIPNRRQIKDSDKAQIDSKHKSGIATSQITGFLAGQVGVGFSMKDLYNYIDKNRRAKIVDGDANATISYLEGKADSEPMAVAKYSLTDDNRLGNLFWADGLSRVDYQYFGDVVAFDSTCKKNKYNKPLFILSGTNHNRQTCIFGFALLEDECAGTYKWLLENFLEVMMGKAPSVLVTDGDRAINDAIKVTFPNATHRLCAWHLQKNATSNIKSQGFCEAFKSCIYANCDIDDFEKSWHEIVERFELQDNEWVKKVYEMKEMWATAYLRDKFCAGFITTSICEGINSFIKRFLKSRHNILELVQNLERAVWVYRNNELDAQFKSINGEPVVMTGLDPIERSAANVYTREIFKDVLKQIDGAGAVFVTSCENVGATVVYKVARYGKPNHEYTVLKDMNLYKYECTCNMWNGYGIPCSHLFCVMKYEHVTELPPSLILRRWCKDAKSYEEVSNVGEEDSDKAFLLRYGALSAASRWMSYLGARKLPYFRHTMEGISRISSGLEHKCGLAHGGEPVENDEKIDDPVVAKTNGAPTAMKDRSKKRLCSSCLLVGHTKRTCPKLICGKSPFDEDDYDLPSGSYDDLDSNDGANLEGHEDVAESGRSKTDLNACEDTSTGPTEGYLRHEFNNVQCNQ* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0853 738 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 561 IPR031052 GO:0006355
Aev01g0853 738 Pfam MULE transposase domain 220 314 IPR018289 -
Aev01g0853 738 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Aev01g0853 738 MobiDBLite consensus disorder prediction 692 711 - -
Aev01g0853 738 MobiDBLite consensus disorder prediction 679 726 - -
Aev01g0853 738 Pfam SWIM zinc finger 497 525 IPR007527 GO:0008270
Aev01g0853 738 SMART 26again6 508 535 IPR006564 GO:0008270
Aev01g0853 738 ProSiteProfiles Zinc finger SWIM-type profile. 497 533 IPR007527 GO:0008270
Aev01g0853 738 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 3 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0853 Aev-Chr1 8324111 8326426 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev01g0853 MULE 2.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0853 - - ahf:112713074 754.207