Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0813 ATGTTTGAGTTGCTTAGGTGGGGCGGTCTCCGGTCATCTCGCGGAGATAACAGTGCACGGTTGGTGCAGTATCGACGGATACTGGATTTCATCTCTATGGATGGGTTCCGATGGACACCATATTCTGACATGGACGTGATGCAGATTGTTCCGGATCATGTCCAGCAGCACTCTGTGCTGTTTCGTTCACATATCCCATCTCCTCCGGCTGACCTCAGCCGCGTTCATGGCATTGATGGGAGAGGACGTCCCTCGAGATGGTGGCCGAGGGAGCACAGAGATTATTATGATATATGGGGAGATCGATATGATCGTGTGTTCACTGGGATGATGACACATGATTATCGTCCTTCAGCAGAGTATCTTCAGTGGTGGTCCTTGAGTCCGTTTAGATATCTAGGCGGAGGTCCCCCTGGCCCAGACGAGATCCCTCCAGGGTTGCCTGATGGAGTTGGCCTTGGTGCAGGTCCTCAGATTCCACACCCACCAGCAGCCCCTGATAGGAGACGTGCACGCACGAGAGCACGGACGGGCACACGTCAGAGCAGACGCCAGTACCCTATTGGGACTGCGGATGTGGGTGACTACTTTATTCCGCGCCAGACCCAGACTCAGACGCAGTCGCAGACTCGGCCGCAGTCCCAGTTGCCCCAGCAGTCGCATGTCGCACCGGATACGCAGACAGAGATGCACTTTGAGTCTAGGGTAGCTGCTGGAGGATCTATGTTTTTTGCTGGATTATCGTCAGATTGGAGGAGTGGTCCTGGGCAGAGCTCGCGCGATGCACCTGGATCGAGCTCGCAGGCTGCAGCAGGGGGAGACAGTGATTGTTATAGGCCGACGATTGAGTCAGTGGACGATATTGGTATATCCATCACTGATGATGATCTTGATATGTTTGATGCATATCTTCGTCGACAGCTCCATAGCGGTGAAGCTATTCCTTACAATGTAACGGTGGTATGGATAAGATCGGAAATTGAAGAAAAAACTGAACTTACACCGACATTTGCACAAAAATATCGAAGACGATTACCTAGTCAAATCAAATTGAAAACTCCGTCTGGAAAAGAATGGCAAATAAAATGTGCAAAAAGAGGTGACAAGGTATGGTTCACAGACGGTTGGAAGGATTTTGTACAACATTTTTCAATGTGTTATGGTTACACGGTAGGACTCCACTATGATGAAGAAAATACATTTGACGTTGAGATATTTGACGAAAATGAGGTTGAAGTCTCGTACGACTCTGAAGGAGATGAAGGAGACAGTAGTTTAGCTGACGACTAA 1290 0.4953 MFELLRWGGLRSSRGDNSARLVQYRRILDFISMDGFRWTPYSDMDVMQIVPDHVQQHSVLFRSHIPSPPADLSRVHGIDGRGRPSRWWPREHRDYYDIWGDRYDRVFTGMMTHDYRPSAEYLQWWSLSPFRYLGGGPPGPDEIPPGLPDGVGLGAGPQIPHPPAAPDRRRARTRARTGTRQSRRQYPIGTADVGDYFIPRQTQTQTQSQTRPQSQLPQQSHVAPDTQTEMHFESRVAAGGSMFFAGLSSDWRSGPGQSSRDAPGSSSQAAAGGDSDCYRPTIESVDDIGISITDDDLDMFDAYLRRQLHSGEAIPYNVTVVWIRSEIEEKTELTPTFAQKYRRRLPSQIKLKTPSGKEWQIKCAKRGDKVWFTDGWKDFVQHFSMCYGYTVGLHYDEENTFDVEIFDENEVEVSYDSEGDEGDSSLADD* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0813 429 MobiDBLite consensus disorder prediction 251 272 - -
Aev01g0813 429 MobiDBLite consensus disorder prediction 136 228 - -
Aev01g0813 429 Pfam B3 DNA binding domain 334 408 IPR003340 GO:0003677
Aev01g0813 429 PANTHER B3 DOMAIN-CONTAINING 314 421 - -
Aev01g0813 429 Gene3D - 317 410 IPR015300 -
Aev01g0813 429 SMART B3_2 319 409 IPR003340 GO:0003677
Aev01g0813 429 MobiDBLite consensus disorder prediction 248 278 - -
Aev01g0813 429 ProSiteProfiles B3 DNA-binding domain profile. 316 409 IPR003340 GO:0003677
Aev01g0813 429 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1-LIKE 314 421 - -
Aev01g0813 429 SUPERFAMILY DNA-binding pseudobarrel domain 323 409 IPR015300 -
Aev01g0813 429 MobiDBLite consensus disorder prediction 197 227 - -
Aev01g0813 429 CDD B3_DNA 337 407 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0813 Aev-Chr1 7919675 7921951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0813 325 419 B3 DNA Binding Superfamily AT3G18990 34.375 3.15e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev01g0813 B3 9.9e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0813 - - gmx:102669906 75.8701