Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0811 ATGGGTCGCATTCCATGCTGTGAGAAGGAGAATGTGAAGAGAGGACAGTGGACACCTGAGGAAGATAACAAGCTCTCATCCTACATTGCTCAACATGGCACTCGCAACTGGCGCCTTATCCCTAAGAATGCAGGAATGGGAATTGACCCTGTAACCCACAAGCCATTCTCACATCTAATGGCTGAAATTGCCACAACATTGGCACCTCCACAAGCAGCACACTTAGCTGAAGCAGCACTAGGGTGCTTCAAAGATGAGGTTCTCCACCTTCTCACCAAGAAGCCAATTAACTTCCAACCCCAAGGGAACAACAACAATAGCAACAACATCACAGATTATATTAACTGTAAGCCAGAGGAGAAAGATGACACCGTTGAGAAGATTAAGCTTGGCCTATCAAAGGCTATACATATACAAGATGAAGCTGAAATGATACCCTCCAATAATAAGCCTTGGGAGGCGACTGCGGCTACTTCTGCAAGCTATGCATTGCCGTACGGTGTTTTCCCGGCAATGCAAGGGTTTCAGTTCAGTCCTTCATCTTTTGGAAGTAAAGGGGATGCATCACCATGGAGCCAGAGTTTATGTACTGGAAGCACATGCACTGTTGTGGATCAGCAAAACCAGTTGCATGAAAAGCTTGAAGAGAATGGTGATGATTCTGAGGCTACTAAAGAGATTAGAAATCTTTCTAATATATTCAACTCAGACTGTGTCTTGTGGGATTTACCAGCAGATGATTTGATCAACCCCATGGTATGA 762 0.4475 MGRIPCCEKENVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKPINFQPQGNNNNSNNITDYINCKPEEKDDTVEKIKLGLSKAIHIQDEAEMIPSNNKPWEATAATSASYALPYGVFPAMQGFQFSPSSFGSKGDASPWSQSLCTGSTCTVVDQQNQLHEKLEENGDDSEATKEIRNLSNIFNSDCVLWDLPADDLINPMV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0811 253 Coils Coil 204 224 - -
Aev01g0811 253 PANTHER F14D16.11-RELATED 45 253 - -
Aev01g0811 253 Gene3D - 6 50 - -
Aev01g0811 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 45 IPR017930 -
Aev01g0811 253 PANTHER TRANSCRIPTION FACTOR MYB80 1 46 - -
Aev01g0811 253 CDD SANT 17 45 IPR001005 -
Aev01g0811 253 SUPERFAMILY Homeodomain-like 8 44 IPR009057 -
Aev01g0811 253 Pfam Myb-like DNA-binding domain 14 45 IPR001005 -
Aev01g0811 253 ProSiteProfiles Myb-like domain profile. 9 42 IPR001005 -
Aev01g0811 253 PANTHER TRANSCRIPTION FACTOR MYB80 45 253 - -
Aev01g0811 253 PANTHER F14D16.11-RELATED 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0811 Aev-Chr1 7897858 7900134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0811 1 46 MYB Transcription Factor Family AT5G56110 95.652 2.14e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev01g0811 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0811 K09422 - gmx:100800764 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0811 01 7897858 7900134 Aev01g0811 01 7897858 7900134 ECH