Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0778 ATGAACTGGGCTCATCAACACAAGCAAGTGGTCCCAATATCGGTGTTTGTGGCGGTTCTCTGTTTCTGTTTACTCTTTGGTCACTTACTTGAAGAGAATCGATGGGTTAACGAATCCATTGTTGCCATTATCATTGGGTTCATAGCTGGAAGCATAATCTTATTAATCACCAAGGGAAAAAGTTCTCACATTCTTACCTTTGATGAAGAGCTATTCTTCATATATCTCCTCCCTCCCATTATATTCAATGCCGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTCTTAACCATCATGATGTTTGGGGTGATCGGAGTTTTCATTTCAGCATCTATTATTACTGGTGGCTGCTGGTGGTTGTTTCCCAAGTTGAACTTCCTTGGCCTTACTGGGAGGGATTATCTTGCAATAGGAACAATTTTCTCAGCAACAGACACAGTTTGTACCCTGCAGGTTCTGCATCAAGATGAGACTCCATTACTATACAGCCTTGTCTTTGGGGAAGGAGTAGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAATTAGATGTTTCCAGACCGAGTGGCAGGACATTGCAAGTCATTGGAGATTTCTTGTATCTGTTCTCAACAAGCACTGGTCTTGGAGTATTTGCCGGACTTCTCACAGCATATATCTTGAAAGGCTTAAGCTTTGGCAGACATTCAAGTGTTCGTGAAATTTCACTGATGATTTTAATGGCATATCTATCCTACATGTTGGCAGAGCTACTTGAACTAAGTGGCATCCTTACCGTTTTCTTTTGTGGAATACTAATGTCACATTATGCTTGGCATAATGTGACAGAAATTTCAAGAATAACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACTTTCATATTCCTGTATGTGGGCATGGATGCACTTGACATTGAAAAGTGGAGAATGACCAAATTAAGTTTTGGAAGTTTGATGGGAATCTACTGCAGCTTAATCTTCCTGACATTGCTTGGGCGGGCTGCATTTGTTTTTCCTCTCTCAGCTTTTGCCAATTATATGAATAGGCGTGCTGAGAGAGCATCAAGTATCACATTCAAACACCAGGTAATCATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTCTCCATTGCTTTAGCTTTCAAACAGTTTACATACTCTGGTGTTACTTCTGATCCAATTGATGCGACAATGATTACCAACACCATTATTGTTGTTCTTTTCAGCACACTGGTGTTTGGTTTTCTAACAAAACCACTTATCAGATATCTGCTTCCACCAAACAACGAATCAAGGAGAATCATAATCCGTGAAGAGTCAGCCGGGCCACCTGGTGAGGACTTGAACCTTCCTCTGCTATCCCTCCAAGAGTCGGCGGCCACCAACATGAGTCGCGCGAAGGAAAGCTTGTCGATGTTAATGGAAAGTCCTGTGTACACCATACATTACTATTGGAGGAAGTTTGATGATGCATACATGAGACCTGTATTTGGGGGACCTCATGGTAACCGGTCACAGTGCTAG 1551 0.4178 MNWAHQHKQVVPISVFVAVLCFCLLFGHLLEENRWVNESIVAIIIGFIAGSIILLITKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISASIITGGCWWLFPKLNFLGLTGRDYLAIGTIFSATDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRPSGRTLQVIGDFLYLFSTSTGLGVFAGLLTAYILKGLSFGRHSSVREISLMILMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDIEKWRMTKLSFGSLMGIYCSLIFLTLLGRAAFVFPLSAFANYMNRRAERASSITFKHQVIIWWAGLMRGAVSIALAFKQFTYSGVTSDPIDATMITNTIIVVLFSTLVFGFLTKPLIRYLLPPNNESRRIIIREESAGPPGEDLNLPLLSLQESAATNMSRAKESLSMLMESPVYTIHYYWRKFDDAYMRPVFGGPHGNRSQC* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0778 516 Gene3D - 12 436 IPR038770 -
Aev01g0778 516 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 13 448 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aev01g0778 516 PANTHER SODIUM/HYDROGEN EXCHANGER 1 512 - -
Aev01g0778 516 PANTHER SODIUM/HYDROGEN EXCHANGER 1 512 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aev01g0778 516 PRINTS Na+/H+ exchanger signature 100 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aev01g0778 516 PRINTS Na+/H+ exchanger signature 71 82 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aev01g0778 516 PRINTS Na+/H+ exchanger signature 85 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aev01g0778 516 PRINTS Na+/H+ exchanger signature 140 150 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aev01g0778 516 Pfam Sodium/hydrogen exchanger family 17 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0778 Aev-Chr1 7403089 7413676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0778 4 516 Antiporters AT5G55470 72.780 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0778 - - gmx:100813332 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0778 01 7403089 7413676 Aev01g0778 01 7403089 7413676 ECH