Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0770 ATGGGTATCTCTCGTGATTCCATGCACAAGAGGCGCGCCACTGGCGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCTGCAAACACAAAGCTATCTAGCAACAAAACGGTTAGGAGGATTAGGGTTCGAGGTGGGAATGTGAAGTGGCGTGCTTTGAGGCTCGATACTGGGAATTACTCATGGGGGAGTGAAGCTGTGACTCGCAAGACGAGGATTCTTGATGTGGTGTATAATGCATCCAATAATGAGCTGGTTCGTACTCAGACATTGGTGAAGAGTGCTATTGTTCAGGTTGATGCTGCACCTTTCAAGCAGTGGTATCTGCAACATTATGGTGTTGACATTGGTCGCAAGAAGAAGGGTGCAACTTCTGCCAAGAAGGAAGGAGAGGATGCTGAAACTGTGACTGAGGAAGTGAAGAAGAGTAACCATGTCTTGAGAAAGCTGGAAAAGCGTAAGCAGAACCGGGTGCTTGATGCTCACATTGAAGAACAATTTGCAGGTGGTCGACTTTTGGCTTGTATCTCATCTCGGCCTGGTCAATGTGGTCGTTCTGATGGATATATATTAGAGGGGAAAGAACTTGAATTCTACATGAAGAAGATTCAGAAGAAGAAGGGCAAGGGTGCTGCTTAA 657 0.4658 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKGATSAKKEGEDAETVTEEVKKSNHVLRKLEKRKQNRVLDAHIEEQFAGGRLLACISSRPGQCGRSDGYILEGKELEFYMKKIQKKKGKGAA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0770 218 Gene3D - 162 215 - -
Aev01g0770 218 Gene3D - 32 161 - -
Aev01g0770 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Aev01g0770 218 MobiDBLite consensus disorder prediction 1 41 - -
Aev01g0770 218 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Aev01g0770 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 - -
Aev01g0770 218 MobiDBLite consensus disorder prediction 11 26 - -
Aev01g0770 218 CDD Ribosomal_S8e_like 5 197 - -
Aev01g0770 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Aev01g0770 218 Coils Coil 139 159 - -
Aev01g0770 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0770 Aev-Chr1 7339396 7341342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0770 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.466 9.74e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0770 K02995 - gmx:100527325 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0770 01 7339396 7341342 Aev01g0770 01 7339396 7341342 ECH