Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0702 ATGGGCTATACCCAAAAGGAAGAAGCTTCACCAGCAGTGCAGCAACAAGACCCATCATCCCAGCAGAGTATACAACAAGAAGGCATCAATGTTGATAATGTTGTGAGAAAAAGACACTATAGAGGAGTTAGGCAGAGACCATGGGGAAAATGGGCAGCCGAAATCAGAGACCCTAAAAAAGCAGCTAGAGTGTGGCTTGGCACCTTTGAAACCGCAGAGGCAGCGGCAGCTGCTTATGATGCTGCTGCCTTGAAATTCAAAGGCACCAAAGCCAAACTCAATTTTCCTGAACGCGTTGTCGCCAGTGTCACATCATCGTCAATATCGCCACCACCTTACAACAATTATGTTTCAGCATCACCACCACCGACGACACCCGGACCTCAAGTTTATCTTCCTCAGTCTCTTCCTCCTCCTTATCCTCGTCCTTTTTCGCCGTCCGGTGAGGGGTTCCCTAACCTAATGCAGTATGCACAGTTGCTTTGGAGTAGGGATGATGATGACATACAACGTGCTGCTTCAGGCCTTAATTATTATTACCACAATAATAATAATAATAATAATGTTAATGACGCTTTTAATCATAATTCGAGTTCTACAGCTTCTTCGGCTACTTCTTCATCAGTTGTGTCTGATCAACATGTTGGAGAGCATCGTCATATGAGTGGTTCTTGTGGCGGTTCTGATTATTTTTTTGATCACTATCAAGGGAGTGGTGGTTTTGATGATGACCGGAATTGA 741 0.4453 MGYTQKEEASPAVQQQDPSSQQSIQQEGINVDNVVRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAAAYDAAALKFKGTKAKLNFPERVVASVTSSSISPPPYNNYVSASPPPTTPGPQVYLPQSLPPPYPRPFSPSGEGFPNLMQYAQLLWSRDDDDIQRAASGLNYYYHNNNNNNNVNDAFNHNSSSTASSATSSSVVSDQHVGEHRHMSGSCGGSDYFFDHYQGSGGFDDDRN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0702 246 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Aev01g0702 246 MobiDBLite consensus disorder prediction 1 30 - -
Aev01g0702 246 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR-LIKE PROTEIN ISOFORM 2 24 216 - -
Aev01g0702 246 MobiDBLite consensus disorder prediction 189 212 - -
Aev01g0702 246 Gene3D AP2/ERF domain 38 98 IPR036955 GO:0003700|GO:0006355
Aev01g0702 246 PANTHER DNA-BINDING DOMAIN 24 216 IPR044808 GO:0003700|GO:0009873
Aev01g0702 246 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Aev01g0702 246 MobiDBLite consensus disorder prediction 104 126 - -
Aev01g0702 246 MobiDBLite consensus disorder prediction 189 221 - -
Aev01g0702 246 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Aev01g0702 246 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Aev01g0702 246 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Aev01g0702 246 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Aev01g0702 246 CDD AP2 39 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0702 Aev-Chr1 6526827 6532260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0702 11 176 AP2-EREBP Transcription Factor Family AT5G13330 53.614 1.83e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev01g0702 AP2 9.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0702 - - ahf:112754987 187.963