Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0697 ATGGAAGTCCAAGCACCAGAGCGAGTTTTACAAGATGTACAAAGAAGTATCAATGTCTCAAGAAGGAACTTGAGTTCTTTCTCATGTAGAACTGGTAACCCGATTGATGATTGCTGGCGTTGCGAACCAAATTGGGCAAGCAACAGGAAAAAGCTAGCAGATTGCGCTATTGGGTTTGGCAAGCAAGCAGTGGGAGGAAGAAATGGTCGAATCTATGTGGTCACTGACTCCGGCGACAACAATCCAAACAACCCCAAGCCTGGAACTTTGAGACATGCTGTTACACAACACGAGCCATTATGGATCATTTTCAACAAAGATATGAATATCACTCTCAAGCAGGAACTTGTAATGAACTCCTTCAAGACAATAGATGGAAGAGGTGTTAGTATTCATATTACTGGTGGTGGTTGCATAATGGTACATTTCACGAATAACATAATCATCCATGGCATCCACATCCATGATTGTGATAATGATGGAATTTCCATCTTGAATTCGAAGCACATATGGGTTGACCATTGCTCGTTATCTAGGTGCCATGATGGTCTCCTTGATGCAACTCATGGATCCACATGTATTACCATCTCAAACAATTACATGACCCATCATGACAAGGTCATGCTCTTGGGCCATAGTGACTCGTACACAAAAGATAAGGAAATGCATATCACAATAGCCTTCAATCATTTTGGAGAAGGGCTTGTCCAAAGGATGCCAAGATGTAGACATGGATATTTTCATGTTGTTAACAATGACTATACTCATTGGGAAATGTATGCAATCGGTGGTAGTGCTAACCCTACCATTAACAGCCAAGGGAACAGATTTCTTGCACCGGATGACAAATCTAGCAAGGAGGTAACCAAACGGGATGATGCGCCCGAGAATGAATGGAAGCAATGGAATTGGAGATCTGAGGGGGACATGTTCTTAAATGGTGCATTCTTTAAGAAATCAGGAGCAGTTGGTTCTAGTAGCTATTCCAGGGCATCAAGTCTTAGTGCAAGACCATCTTCTTTGGTTGGATCGATGACACAAACTGCTGGTGCACTCAGTTGCAAGAAAGGCAACCGCTGTTGA 1083 0.4266 MEVQAPERVLQDVQRSINVSRRNLSSFSCRTGNPIDDCWRCEPNWASNRKKLADCAIGFGKQAVGGRNGRIYVVTDSGDNNPNNPKPGTLRHAVTQHEPLWIIFNKDMNITLKQELVMNSFKTIDGRGVSIHITGGGCIMVHFTNNIIIHGIHIHDCDNDGISILNSKHIWVDHCSLSRCHDGLLDATHGSTCITISNNYMTHHDKVMLLGHSDSYTKDKEMHITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDKSSKEVTKRDDAPENEWKQWNWRSEGDMFLNGAFFKKSGAVGSSSYSRASSLSARPSSLVGSMTQTAGALSCKKGNRC* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0697 360 PANTHER OS04G0137100 PROTEIN 3 357 - -
Aev01g0697 360 PRINTS Pollen allergen Amb family signature 260 279 IPR018082 -
Aev01g0697 360 PRINTS Pollen allergen Amb family signature 238 257 IPR018082 -
Aev01g0697 360 PRINTS Pollen allergen Amb family signature 302 326 IPR018082 -
Aev01g0697 360 PRINTS Pollen allergen Amb family signature 331 354 IPR018082 -
Aev01g0697 360 PRINTS Pollen allergen Amb family signature 55 72 IPR018082 -
Aev01g0697 360 MobiDBLite consensus disorder prediction 274 297 - -
Aev01g0697 360 Gene3D - 32 353 IPR012334 -
Aev01g0697 360 Pfam Pectate lyase 113 277 IPR002022 -
Aev01g0697 360 PANTHER PECTATE LYASE 18-RELATED 3 357 IPR045032 GO:0030570
Aev01g0697 360 MobiDBLite consensus disorder prediction 280 297 - -
Aev01g0697 360 SUPERFAMILY Pectin lyase-like 33 351 IPR011050 -
Aev01g0697 360 SMART amb_all 107 283 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0697 Aev-Chr1 6458971 6461344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0697 1 360 Polysaccharide Lyase AT5G63180 68.052 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0697 K01728 - zju:107415231 588.956