Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0679 ATGGGTGGTTGTCTAAGTAAAGGCAAAGATTCAGAGTCAGAACACAATGGGTACAGACATGATGGTGTGAAAAACCAGAAGCCCAATGAATCTAAAGTCAACCAATCAAGAACACAGGCTCATGAAAATCCTGCATCAACTCAGAGCCAAACAATACCTCATCAGACACCATGGAATAAGCCTTCTGTTCCTGAAGCCCCAATCCCTAAACCTTTTCCAAAGCAAGACACAATCCTTGGGAAACCATTTGAGGATGTGAAGCAGTTCTATACACTTGGGAAAGAACTTGGAAGAGGGCAATTTGGGGTGACACATCTCTGCACAGAGAACTCAACTGGGTTGCAATATGCTTGCAAGTCAATCTCAAAAAAGAAACTTGTTAGTAAATCTGACAAGGAAGATATCAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGTCAACCCAATATTGTGGAGTTCAAAGGTTCTTATGAGGACAAGAATTCTGTCCATGTTGTGATGGAGCTTTGTGCTGGTGGTGAGCTTTTTGATAGGATTATTGCTAAAGGGCATTACAGTGAAAGAGCTGCTGCTTCAATTTGCAGACAAATTGTTAATGTTGTTCATATATGCCATTTCATGGGTGTTATGCATAGGGATCTGAAGCCTGAGAATTTCTTGCTCTCTAGTAAGCATGAGAATTCACTTCTCAAGGCAACAGATTTTGGCTTGTCAGTTTTCATTGAAGAAGGAAAGGTGTATCGCGATATAGTTGGGAGTGCATATTATGTTGCTCCAGAAGTTCTAAGGCGCAGATGTGGCAAGGAAATAGATATATGGAGTGCAGGAGTTATATTATATATCTTACTTAGTGGTGTTCCTCCATTTTGGGCAGAGAATGAAAAGGGAATATTTGATGCCATATTGGCAGGTCATATTGATTTTGAAAGTCAACCATGGCCTAAAATATCAAACAGTGCCAAGGACCTTGTTCGTAAGATGCTTATACAGGATCCAAAGAAACGCATTACTTCTGCGCAGGTTTTAGAGCACCCATGGATTAGAGAAGATGGAAATGCTTCTGACAAACCAATAGATAGCGCCGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAATTAAAGAAACTTGCCCTGAAGGTGATTGCTGAGAATATGTCTGAAGAAGAGATCCAAGGTTTGAAGGCAATGTTCACAAATATGGACACTGATAAAAGTGGTGCAATCACCTATGAAGAACTAAAGGCTGGATTGCAGAGACTTGGCTCAAAGCTCACTGAGGCTGAAGTCAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGCACCATTGACTACATAGAATTCATAACTGCTACAATGCATAGACACAAGTTAGAAAGAGATGACCAACTTTCCAAGGCCTTCCAATATTTTGACAAAGACAACAGTGGTTTCATTACAAGAGATGAACTCCAAACTGCAATGACAGAATATGGTATGGGTGATGAAGCCACAATCAAAGAAATTATTTCTGAAGTTGACACAATTATATCTGAAGTCGATACTGATAATGATGGTAGGATCAACTATGAAGAATTCTGTGCAATGATGAGGAGTGGAACCCCACAAGGCAAGCTATTCTGA 1635 0.4031 MGGCLSKGKDSESEHNGYRHDGVKNQKPNESKVNQSRTQAHENPASTQSQTIPHQTPWNKPSVPEAPIPKPFPKQDTILGKPFEDVKQFYTLGKELGRGQFGVTHLCTENSTGLQYACKSISKKKLVSKSDKEDIKREIQIMQHLSGQPNIVEFKGSYEDKNSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKHENSLLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILAGHIDFESQPWPKISNSAKDLVRKMLIQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSEEEIQGLKAMFTNMDTDKSGAITYEELKAGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHKLERDDQLSKAFQYFDKDNSGFITRDELQTAMTEYGMGDEATIKEIISEVDTIISEVDTDNDGRINYEEFCAMMRSGTPQGKLF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0679 544 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
Aev01g0679 544 SUPERFAMILY EF-hand 372 535 IPR011992 -
Aev01g0679 544 SMART serkin_6 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0679 544 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Aev01g0679 544 CDD STKc_CAMK 89 347 - -
Aev01g0679 544 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Aev01g0679 544 MobiDBLite consensus disorder prediction 28 58 - -
Aev01g0679 544 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-LIKE 31 540 - -
Aev01g0679 544 SUPERFAMILY Protein kinase-like (PK-like) 89 355 IPR011009 -
Aev01g0679 544 SMART efh_1 467 495 IPR002048 GO:0005509
Aev01g0679 544 SMART efh_1 395 423 IPR002048 GO:0005509
Aev01g0679 544 SMART efh_1 431 459 IPR002048 GO:0005509
Aev01g0679 544 SMART efh_1 509 537 IPR002048 GO:0005509
Aev01g0679 544 CDD EFh 467 535 IPR002048 GO:0005509
Aev01g0679 544 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Aev01g0679 544 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Aev01g0679 544 MobiDBLite consensus disorder prediction 1 78 - -
Aev01g0679 544 Coils Coil 413 433 - -
Aev01g0679 544 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Aev01g0679 544 Gene3D Transferase(Phosphotransferase) domain 1 176 356 - -
Aev01g0679 544 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Aev01g0679 544 MobiDBLite consensus disorder prediction 8 27 - -
Aev01g0679 544 Gene3D - 357 537 - -
Aev01g0679 544 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Aev01g0679 544 Pfam EF-hand domain pair 396 456 IPR002048 GO:0005509
Aev01g0679 544 Pfam EF-hand domain pair 466 535 IPR002048 GO:0005509
Aev01g0679 544 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0679 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Aev01g0679 544 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Aev01g0679 544 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
Aev01g0679 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 540 - -
Aev01g0679 544 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0679 Aev-Chr1 6247007 6253620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0679 1 540 EF-hand Containing Proteins AT3G20410 73.945 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aev01g0679 Pkinase 5.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0679 K13412 - gmx:100798651 918.302