Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0678 ATGTTTCTCCACACTCTCACGAGTGCTACTCCTTCGAAACCCCGCCTTTCTCACCCACTCTCCTTATCCCCCAAACTCCACCATTTCCCCTTCTTTCTTCATCTCTCATCACACAACCACAATTCCCGCTCCTCATTTTCTCCGCCGATTCGGTGCGGCATCAGGGAACTCCGAGAGAGGATCCAGACGGTGAAGAACACCCAGAAGATCACCGAAGCGATGAAGCTCGTCGCCGCCGCAAGGGTCCGTCGAGCGCAAGAAGCCGTCATCAATGGAAGACCCTTTGCCCAGACACTCGCCGAAGTGCTGCACGACATCAGCGTACAGCTACGAACCGAAGATATCGACGCCCCCTTCACCGATGTCAGGCCTGTGAAGAGGGCCGCCATCGTCGTCATCACCGGCGACCGAGGCCTCTGCGGCGGCTTCAACAACGCCGTCACGAGAAAAGCAGAGCACCGAATCAACCAGCTAGAGAATCTCGGCATCGATTGCGTTGTGATTAGTGTTGGCAAAAAGGGTAACTCGTTTTTCAGCAGCAGGGGGGAGAAGTTTCAAGTTGATAGGTTAATTGAAGGTGGGAACTTCCCCACCGCGAAAGAAGCGCAGACAATTGCTGATGATGTTTTCTCATTGTTTATTACCGAGGAGGTTGATAAGGTTGAGCTTGTGTACACAAAATTTGTGTCTTTGGTGAAGTTTGATCCTGTGGTTCAGACCCTATTACCTTTGTCTACCAATGGAGAAGTTCGTGATGTTAATGGAAACTGTGTTGATGCCATGGAAGATGAGTTCTTCAGATTGACCTCTAAAGAAGGAAAATTGGCTGTGGAAAGGGATGTTGGTGTTTTTGTGAAGAGGGAAAAAGGGGAATTTTTGCCACTTATGCAGTTTGAGCAGGACCCTGTTCAGATCCTTGATGCTATGATGCCTCTCTATTTGAACAGTCAGATTCTGAGGGGAGCTCTTTTGGCCTCCATTGTCCTGCTAGTTGCAGATCCGAGATTTCATCCTACAATTCGGGGTTTGGACAGTGTCAAAAGACAGAGACACGGTGGTGCACAATGTGTGTTTGGAACATGGGATGCGGCATGA 1095 0.4977 MFLHTLTSATPSKPRLSHPLSLSPKLHHFPFFLHLSSHNHNSRSSFSPPIRCGIRELRERIQTVKNTQKITEAMKLVAAARVRRAQEAVINGRPFAQTLAEVLHDISVQLRTEDIDAPFTDVRPVKRAAIVVITGDRGLCGGFNNAVTRKAEHRINQLENLGIDCVVISVGKKGNSFFSSRGEKFQVDRLIEGGNFPTAKEAQTIADDVFSLFITEEVDKVELVYTKFVSLVKFDPVVQTLLPLSTNGEVRDVNGNCVDAMEDEFFRLTSKEGKLAVERDVGVFVKREKGEFLPLMQFEQDPVQILDAMMPLYLNSQILRGALLASIVLLVADPRFHPTIRGLDSVKRQRHGGAQCVFGTWDAA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0678 364 CDD F1-ATPase_gamma 54 328 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aev01g0678 364 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 69 321 IPR035968 GO:0015986|GO:0045261|GO:0046933
Aev01g0678 364 PANTHER ATP SYNTHASE GAMMA CHAIN 4 321 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aev01g0678 364 Gene3D - 77 328 - -
Aev01g0678 364 Pfam ATP synthase 54 323 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aev01g0678 364 PRINTS ATP synthase gamma subunit signature 219 236 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aev01g0678 364 PRINTS ATP synthase gamma subunit signature 125 144 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aev01g0678 364 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 4 321 - -
Aev01g0678 364 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 54 322 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0678 Aev-Chr1 6242889 6245525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0678 21 321 Primary Pumps ATPases AT1G15700 68.977 6.08e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0678 K02115 - rcu:8282943 403.29