Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0675 ATGCCCTCTGCTCAAGACCCATTCTACGTTGTCAAGGCCGAGATTCAAGAATCTATTGATACATTGCAATCTACTTTTCACCAATGGGAAAACACTCTTGATGCTGGGGAGCGAGTACAACTTTCAAAGGAGGTTCTTGCTGGATGTGAAAGTATAGAGTGGCAGGTGGATGAATTGGAGAAAGCAATTTTTTTAGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTGGAGCTCGAAAGCCGGAGGATATGGACAAGTAGTTCTCGAACTCAGGTAGGCAAATTGAAGAAAGCAGCAGAAGCTGGAAAGGGCTCAAGTACAACAAGCCATGCTAGTGTAAATGAGATGCACCGAGAACTAATGAAGTTACCTAATTCCCATCTAACTGGCTCATCCAGCCAGTATGTTGCCAATGGTCATGATGATTTCATAAAGTCAGAATCAGATAGACAAATGCTTCTGATAAAGAGACAGGATGAGGAGTTGGATGAACTTAGTATAAGTGTGCAAAAAATTGGAAGTGTTGGACTTACAATACATGAAGAGCTTCTTTCACAGGAAAGGATTATAGATGAACTGGGTGCTGAGATGGACAGTACAACAAATCGTCTAGATTTTGTCCAAAAAAAAGTGGCAATGGTCATGAAGAAGGCAAGTGCAAAGGGGCAGATCATGATGATATTGGGTTTGTTGGCCCTGTTCATTTTCCTGTTTATCTTGGTGTTCTTTACCTAG 741 0.4157 MPSAQDPFYVVKAEIQESIDTLQSTFHQWENTLDAGERVQLSKEVLAGCESIEWQVDELEKAIFLASRDPSWYGIDEVELESRRIWTSSSRTQVGKLKKAAEAGKGSSTTSHASVNEMHRELMKLPNSHLTGSSSQYVANGHDDFIKSESDRQMLLIKRQDEELDELSISVQKIGSVGLTIHEELLSQERIIDELGAEMDSTTNRLDFVQKKVAMVMKKASAKGQIMMILGLLALFIFLFILVFFT* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0675 246 SUPERFAMILY SNARE fusion complex 152 216 - -
Aev01g0675 246 SMART tSNARE_6 149 216 IPR000727 -
Aev01g0675 246 Coils Coil 192 212 - -
Aev01g0675 246 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Aev01g0675 246 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 154 216 IPR000727 -
Aev01g0675 246 PANTHER SYNTAXIN 1 245 IPR045242 -
Aev01g0675 246 SUPERFAMILY t-snare proteins 5 100 IPR010989 GO:0016020|GO:0016192
Aev01g0675 246 Gene3D - 2 103 - -
Aev01g0675 246 PANTHER SYNTAXIN PROTEIN 1 245 - -
Aev01g0675 246 Gene3D - 161 225 - -
Aev01g0675 246 Pfam SNARE domain 191 242 IPR000727 -
Aev01g0675 246 CDD SNARE_Qc 157 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0675 Aev-Chr1 6220578 6225003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0675 55 246 SNARE and Associated Proteins AT1G28490 67.708 6.98e-88 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0675 K08500 - gmx:100790368 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0675 01 6220578 6225003 Aev07g0243 07 1364369 1373754 PCT