LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g0651	ATGCTCCAGATGTCTCTCCATTACATTTCAACAAACAACACACCTCACCTCTTTCTTTCCAAAACATTCCAGGATCTCTCCCTCTCCCTCTCCTTCTCACAGTCATTTCTATCAATCAATGGATTGTTGGTGCTTCTTCCTGTCACCGCACGGGCCCGTCGCGGGTGCTACCTCTCGCTGCTACTCCTCCAGAGAGAACTGCACCGATGTCGCCTGGTGGTCGGTGGTTCGAGCACAGTAGAGACCCGAGAAAAGACGGCGGTGATGGACCTGTTGGCTGATGATGATGTTGATGAAGATGTTGAAGCTGCTCTCCAATCACCAACATGCTTCGAGATTGGAAGGAAATCAGAGCCATATGATAGCATGACCATTATGAGTTGTGGCTGTTTTGGAGCCTCATCAGCTAAAAAGAAGGGAGTTAGAAGAAGAAACTTTGCTCATCATATCCCTAATGAAATTGATGGAATTCACAAAGAGATGAATGACAACTCAATTCTTAGGGCACTCCCCCCAATGGGAACTGATGGTGAAGTAGTGGAAACATTACCAGATACCAGATCCTTTAAGGTACATGATACGATGTGTACAGATCTCGATAAGTTGGTTGATAGAATCTTAAGGATTCTTCCAGAAATAGAGGCAGCACGCCCGCAATCCTCGACAGGAATACAGTCTTTGTGTTCTCTTAATATTGAAATTAGTAAAGCCAAGCAGCTATTGCAAAATTGCTTCGAATCTAGTAAACTCTACCTGGCTTTGACTGGGGATTTAGTTCTCTCAAAATGCCAAAAGATAAGAAATTCATTACAGAAAAGCTTATTTCAGATTCAGGGTATGGTTCCAGTTATGTTGGCAGCAAAGATTTCTCAAATAGTTGATGATCTTGGATATGTGACATTTGTCCTGAACTCTGCCGAAGAAGAAGCTGGGAGGGTTGTCAGAGAATTGCTACATCAAAGATCTTTGACCTCAGAAAGCGATTCAATGGAAAATTCTGAAGTTAAATCTCTTCAATTTGTAGCACAAAGACTTAATATTACATCCCCAAAGACCATCTTAATAGAGAAACGATCTATTAAGAAGTTGCTGGATAATGTTGGACCAAATGACCTGACACAAAAGAAGATCTTGTCACATCTTTTGGATCTTCTGATGAAGCATCAGAAGTTAATCACGGCAGAACAACCAGAGAAAACTTATTCTCATAGTGAAGAACCAGTCACAACTGAGAACTCTCGTCGTGATTCTCAATGCAACCGTCGTGTTGAGCCAAAACAGTGCTTGAATTATGTTCCATATAGGGCTCACATGAGTGAGTGGCGTGGAGTTACGCCCCCTGATGAATATAAGTGCCCAATATCTTCAAGATTAATGTATGACCCTGTTGTCATTGCTTCTGGAGTTACATATGAAAGGGTGTGGATTCAAAAGTGGTTTGAAGAGGGTAATTCTGTATGCCCAAAAACCAGAAAGAAACTAGTTCATATGGCATTGACTCCTAACATTGCCATGAAGGACTTAATATCAAAGTGGTGCAGAACAAGTGGTGTCTCCATTCCTGACCCATGTAGGCAAGGGGAAGATTTTCTATCATGGGAGGCTTCCTCCACTTCTACTGCAAGTTTTGGAAGTTCTATGAATGATTTGAACTTGCCCTTGGATCTTAGCAACGTGTCACTTGGATCTTCAGACACTAATTATAATTCGGATTCCTCACATGCTAAGACAAGCCATGACTTAAATTTGATGTTGATCAATACTAATGACAATTCTCACAGGCATCAATCTGATGCAGAGATACATGATAAGGATCTGAAGCTTTTGTCTAAACTCCATGATCTTCAATGGGATTCTCAATATCAGGTCATTAACGATATAATTAGCGATTATAGATGCAATTATGAAGCCTTTTCTTCTGTGGCATATGAGAATTTCATTGAACCAATCATAAGATTTCTTAACACTGCATATGAAGTGCATGACTTGAAAGCACTAAGAGCTGGAACTAAGTTGCTTTTAAAATTTGTGAACAGCTGCAGAAATGGTGTGACCAAATTAAGTGAAGATTCATGCAATGTATTGATAAATCTCCTCGATTCAGAAGTGACAGGAGAAGCTCTTGCGATAATGGAAGAACTGTCTAGACATTTCGACAAGGCTAACAGTGCTGCATTATCCAGTGCACTTGCGCCACTTTCCGAGATCCTTAACTCTGGTAACAGAGAGTTCCAAAAAATCACTATTAGAATCATGTGTAATTTGTCATTCAATGGTGAACTTTGTCCTCGGATGGTTTCTCTAAACTGCATTGAAAATTTGCTGCCATTTTTCGACGACGGCACCCTCTTGAGATTCTGTATATGCATAATGAAAAACCTATGTGATACTGAAGAGGGAAGGGTTTCTTTTGCTGAAAACAAAGGAGCAATATCTTCTGTTGCCGAAGTACTCGAGATCGGTACCAATGATGAGAAGGAATATGCACTGGCTATTCTACTCTCTTTGTGCTCGCAACGCGTGGAATACTGCCAGTTGGTTATGTATGAGGGGATTATCCCTTCTCTTGTCAGTATCTCCAATAATGGAAATGATAACACAAAGGCACTTGCTTTGGAACTACTCCGTCTTTTGAGGGATATAGACTATTGTGTTGAACATGAAGATTGTTCTGGTCCAAACCTCGACATATCTCGAGATTCAGACGATCATTTTCAACAGAGGAAACCATCAAAGAAATACACAATTCTTAAGAAACTATCTCTGTTCTCAAAATCCAATTCACTTGCATCAAAGAGCAAGAGATGA	2808	0.406	MLQMSLHYISTNNTPHLFLSKTFQDLSLSLSFSQSFLSINGLLVLLPVTARARRGCYLSLLLLQRELHRCRLVVGGSSTVETREKTAVMDLLADDDVDEDVEAALQSPTCFEIGRKSEPYDSMTIMSCGCFGASSAKKKGVRRRNFAHHIPNEIDGIHKEMNDNSILRALPPMGTDGEVVETLPDTRSFKVHDTMCTDLDKLVDRILRILPEIEAARPQSSTGIQSLCSLNIEISKAKQLLQNCFESSKLYLALTGDLVLSKCQKIRNSLQKSLFQIQGMVPVMLAAKISQIVDDLGYVTFVLNSAEEEAGRVVRELLHQRSLTSESDSMENSEVKSLQFVAQRLNITSPKTILIEKRSIKKLLDNVGPNDLTQKKILSHLLDLLMKHQKLITAEQPEKTYSHSEEPVTTENSRRDSQCNRRVEPKQCLNYVPYRAHMSEWRGVTPPDEYKCPISSRLMYDPVVIASGVTYERVWIQKWFEEGNSVCPKTRKKLVHMALTPNIAMKDLISKWCRTSGVSIPDPCRQGEDFLSWEASSTSTASFGSSMNDLNLPLDLSNVSLGSSDTNYNSDSSHAKTSHDLNLMLINTNDNSHRHQSDAEIHDKDLKLLSKLHDLQWDSQYQVINDIISDYRCNYEAFSSVAYENFIEPIIRFLNTAYEVHDLKALRAGTKLLLKFVNSCRNGVTKLSEDSCNVLINLLDSEVTGEALAIMEELSRHFDKANSAALSSALAPLSEILNSGNREFQKITIRIMCNLSFNGELCPRMVSLNCIENLLPFFDDGTLLRFCICIMKNLCDTEEGRVSFAENKGAISSVAEVLEIGTNDEKEYALAILLSLCSQRVEYCQLVMYEGIIPSLVSISNNGNDNTKALALELLRLLRDIDYCVEHEDCSGPNLDISRDSDDHFQQRKPSKKYTILKKLSLFSKSNSLASKSKR*	936

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g0651	935	SUPERFAMILY	ARM repeat	608	878	IPR016024	-
	Aev01g0651	935	SUPERFAMILY	RING/U-box	439	522	-	-
	Aev01g0651	935	PANTHER	RING-TYPE E3 UBIQUITIN TRANSFERASE	176	927	-	-
	Aev01g0651	935	PANTHER	U BOX DOMAIN-CONTAINING	176	927	-	-
	Aev01g0651	935	Pfam	Armadillo-like	679	780	IPR006911	-
	Aev01g0651	935	MobiDBLite	consensus disorder prediction	399	421	-	-
	Aev01g0651	935	CDD	RING-Ubox_PUB	450	492	IPR045210	-
	Aev01g0651	935	ProSiteProfiles	U-box domain profile.	445	519	IPR003613	GO:0004842\|GO:0016567
	Aev01g0651	935	MobiDBLite	consensus disorder prediction	395	421	-	-
	Aev01g0651	935	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	445	519	IPR013083	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g0651	Aev-Chr1	5971083	5982785	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g0651	180	889	U-box Gene Family	AT4G36550	35.685	2.94e-125	394

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g0651	-		-	gmx:100798951	891.338

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev05g0501	05	3491720	3495345	Aev01g0651	01	5971083	5982785	PCT

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