Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0639 ATGGGTTGGTTTACCAAGTTGCTCAAGGGATCCAACCATAAATCTTCAGGAGAACGATACCACGGGAAATATGGAGATGGAAAAATTTCAGATAATAATGATAATTCAGTGGTAATCAGAGTTTCTGCTTCTAGTAGAAACGAAGTCCGTATTATCACAACATGTCATGTCATTATTCTAGTGGTTTACATGATTTTCGAAAAATATTATGTTGAACTTAACTTGGATGATTTGACGGATATTGAGAAAGAGGAAATTGATTGTGCAATTGCACTCTCTCTTTCAGAGGAAGATCAGAAAGGGAAAAAGGTTATTGAGGATGACTCTCAGTCTTCAGACGATGAAGAACTGTGTGATATTCATGAGGAGGAAGATGAATATCTAGGTAAAGGTGAAGAAGAGGAAGATGACCATCTTGCTAAAATTCAACAGGATGAAGACAAACATCTTGCGGAAGCTCAACTCGAGGAAGATGAACAACTTGCCAGAGCAATTCAAGAAAGTTTGAACATTAGTTCATCTCAACCTGAAAGCGATTCTTTATTTCAACCATTTCAAAACCTCTTTTCACCTGTATACAGAAAATGTGCTGGCTGCAACGGAGAGATTGGCCATGGCAGATTTTTAAGTTGCATGGGCGCTTTCTGGCATCCAGAATGTTTCAGTTGCCATGCTTGTAATCTGCCAATCACTGATTATGAGTTTTCCATCTCTGGAAATCGTCGTTACCATAAATCCTGCTACAAGGAGTTGCATCACCCAAGATGTGATGTTTGCAAGAGCTTTATCCCGCCAAATTCAGCTGGACTCATTGAGTATAGAGCACATCCTTTCTGGCTACAGAAATACTGTCCTTCACACGAGCGTGATGGCACTCCTCGTTGCTGTAGCTGTGAAAGAATGGAGGCAAGGGACACAAAGTATCTTTCGCTTGATGATGGTCGAAAGCTCTGTTTAGAGTGTCTAGACTCAGCTATTATGGACACTCACGAATGCCAACCTCTGTATCTTGAAATACAAGAATTCTATGAAGGTTTAAATATGAAAATAGAGCAACAAATTCCTATGCTTTTAGTAGAGAGACAAGCACTGAATGAGGCAATGGAGGGAGAAAAGAATGGTCATCACCACTTGCCGGAAACCAGAGGACTTTGCTTGTCGGAAGAGCAAACTGTCACCACTATTTTAAGGAGACCAAGGATAGGGGCAGGCTACCGAGTCATCGATATGATAACCGAGCCTTTTAGGCTGATCCGGCGTTGTGAAGTGACGGCCATACTAGTTATTTATGGCCTTCCTAGATTATTGACTGGATCAATCCTGGCTCATGAGATGATGCATGCATGGCTTAGGCTTAAAGGGTATGGCAATTTGAGGCCAGAAGTAGAAGAAGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGAGTCAGAGATGTATTCTGGGTCCAGTAACGATGGTGCATCTTCGTCATCATCATCTTCATCATCCTCGTCATCACCTTCCTCCTCTTCTACGTCATCAAAGAAGGGTAAACGCTCCGACTTTGAGAAGAAACTTGGCGAGTATTTCAAACACCAGATTGAGTCAGATCGCTCATCAGCTTATGGAGATGGATTCAGACAGGGTAACAAGGCTGTGCTCAAGTATGGTCTCAAAAGCACCCTTGACCATATTAGAATGACGGGAAGTTTTCCATATTGA 1704 0.4178 MGWFTKLLKGSNHKSSGERYHGKYGDGKISDNNDNSVVIRVSASSRNEVRIITTCHVIILVVYMIFEKYYVELNLDDLTDIEKEEIDCAIALSLSEEDQKGKKVIEDDSQSSDDEELCDIHEEEDEYLGKGEEEEDDHLAKIQQDEDKHLAEAQLEEDEQLARAIQESLNISSSQPESDSLFQPFQNLFSPVYRKCAGCNGEIGHGRFLSCMGAFWHPECFSCHACNLPITDYEFSISGNRRYHKSCYKELHHPRCDVCKSFIPPNSAGLIEYRAHPFWLQKYCPSHERDGTPRCCSCERMEARDTKYLSLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKIEQQIPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPRIGAGYRVIDMITEPFRLIRRCEVTAILVIYGLPRLLTGSILAHEMMHAWLRLKGYGNLRPEVEEGICQVLAHMWLESEMYSGSSNDGASSSSSSSSSSSSPSSSSTSSKKGKRSDFEKKLGEYFKHQIESDRSSAYGDGFRQGNKAVLKYGLKSTLDHIRMTGSFPY* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0639 567 MobiDBLite consensus disorder prediction 485 515 - -
Aev01g0639 567 Gene3D Cysteine Rich Protein 192 255 - -
Aev01g0639 567 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 223 280 - -
Aev01g0639 567 Pfam LIM domain 196 250 IPR001781 -
Aev01g0639 567 Pfam Protein DA1 345 562 IPR022087 -
Aev01g0639 567 PANTHER PROTEIN DA1-RELATED 2 1 567 IPR045218 -
Aev01g0639 567 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 1 567 - -
Aev01g0639 567 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 156 175 IPR003903 -
Aev01g0639 567 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 191 221 - -
Aev01g0639 567 Coils Coil 139 159 - -
Aev01g0639 567 SMART lim_4 195 247 IPR001781 -
Aev01g0639 567 CDD LIM_DA1 196 248 - -
Aev01g0639 567 ProSitePatterns LIM zinc-binding domain signature. 196 230 IPR001781 -
Aev01g0639 567 ProSiteProfiles LIM domain profile. 194 254 IPR001781 -
Aev01g0639 567 MobiDBLite consensus disorder prediction 485 509 - -
Aev01g0639 567 SMART uim 81 100 IPR003903 -
Aev01g0639 567 SMART uim 156 175 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0639 Aev-Chr1 5871538 5876574 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev01g0639 DA1-like 2.9e-106 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0639 - - gmx:100806605 860.136