Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0603 ATGTCATCATCGAATTCACCTTGCGCTGCATGCAAATTCCTAAGGAGAAAGTGCACACAAGAGTGTGTGTTCGCGCCATACTTCCCACCAGAGAATCCACAACGATTTGCCTGCGTCCATCGAGTCTTTGGAGCCAGCAACGTTGCCAAGCTTCTCAATGAGCTCACCGCCTCGCAGCGAGATGACGCCGTTAAGTCCCTCGCCTATGAAGCAGAGGCGCGCCTCCGTGACCCGGTTTACGGTTGTGTTGGCTTCATCTACGTCCTACAACAACGTCTTCGCCAAATACAAACTGATCTTCTTAATGCCAAGAAGGAGCTTACCTCTTACACAAGCCCTCAGGCCATGCAAGGGCTCCTCCATTCTCAAGCACTTCAAGGGATTCCCCTTGCGGGGAACCCTTTGGCTTCAGCTCTCCTTTACCCTTCCTTGGGTGGAAATCCAACACAACTTTTGACAGCTGTGCTGCATAACACACAACTAGTTGTGCGAGACCCCCAACAACAAGAGCTGTTGGAGGCCCAACAACTGGCTATAGTTGCGGCCACTCGAGAGCAACAAGTTATAATGAGGACATATGAACAACAACAAGAGTTTTTGAGATTTAATTCTGGGTTTGAACCTACCACAGGTTCAATTGCTATTCCGATTGGTGGTGGTGGTGATGAAAATGGAGGGTTTGGCCACCAAATGGGTACACATTCTGGTGGTGGTCAAGTTGAGATGGCTCCTTCATTGGCTTTAGAAACTTTTGAAAATGTGGGTGCTTATGAAATACAACAACCACACAATAGAGGGGAGCATCATGTTGATCATGGTCATCAACACCCTGTTGAGGCCCAACTTCTACTCTCACCACAACAACACTCAGAGAGTGAAGATGGTAGGAGTGTTAGCCCTTCTACTTGA 909 0.484 MSSSNSPCAACKFLRRKCTQECVFAPYFPPENPQRFACVHRVFGASNVAKLLNELTASQRDDAVKSLAYEAEARLRDPVYGCVGFIYVLQQRLRQIQTDLLNAKKELTSYTSPQAMQGLLHSQALQGIPLAGNPLASALLYPSLGGNPTQLLTAVLHNTQLVVRDPQQQELLEAQQLAIVAATREQQVIMRTYEQQQEFLRFNSGFEPTTGSIAIPIGGGGDENGGFGHQMGTHSGGGQVEMAPSLALETFENVGAYEIQQPHNRGEHHVDHGHQHPVEAQLLLSPQQHSESEDGRSVSPST* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0603 302 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Aev01g0603 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 289 - -
Aev01g0603 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 289 - -
Aev01g0603 302 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0603 Aev-Chr1 5572333 5573241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0603 1 245 AS2 family AT5G66870 47.170 2.20e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev01g0603 LOB 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0603 - - gmx:102664012 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0603 01 5572333 5573241 Aev01g0603 01 5572333 5573241 ECH
Aev01g0603 01 5572333 5573241 Aev05g0615 05 4229702 4230637 PCT