Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0580 ATGTTGGAAATGGCTATTGGTGATGAAAAGAAACGGGAAAGGATGGTGAAGAAAGAGGTTGTGGAGTTTCAACAAAATGATCATAATCAAGTTGTAACGCAAGAGAATGTTCCTCTAGCCCAATTGTCTCGGAGGTCTCCTTTAACCATGGATAAACAAAGCAAGGCTATGGAGAATATAAACAAGCTCTTGAGCAGTCCGAAAAAGCCAGTCGCATATAGTGAAGCACAAAAATTTGCAAGTGCTATGAAGGTTACAACAGATGCAACAACTTCTCGTGGTGAGGCCATGTCATCTGCTGTAATTCGAGCAGAGGAGCTCCAATCAAATTTGGGACAAGAATTCCCTAGTTTTGTAAAGTCGCTAGTTAGATCACATGTTGCTAGTTGCTTTTGGATGGGGTTGCCTGTGGCATTCTGTAAAAAGCATTTACCAGATAAGGATACAACAATCACTTTGGAAGATGAATACGGTAAAGAATACAATACGAAATACATTGCTTATAAGACAGGACTGAGTGCTGACAAAGAAAACCCAGATACTAATGTTTCAGCATGCAATAATAGTTCAAAGAGAAAACAGGGTAAATCTGTTCCAATAGATATCCAAAAGAAAAAGAAGACCGACATGGCTAGACTAGAGATTAAGCCTAGGAATAAATCATCAAAACAATCCGAAAAGGACAATGAAGAATCTCTAACACAAAGATTTGAGGGCTTTAAAATGCTTAAATTCAAAGATGTGAAAGGCTTTGAAAATTTCAGCATCATAGTTGATGGAGTGGCAATAGATGTTGAGTTTTCTAATGAAGTCCGAAATAAATACTACAAGCTATGTTATAGCCAACGTGCCTTTCTTCATGAAAATCTCATCAAAGGAATGAACCATAAGTTGATTGCTGGAATTATATTTGAAATTGTCAATATTGCTGATGCAATAAAACTTAGTGTTCTAGCTACCCCAAGAATTGAATTCACAAATTGGGACAAAACTTTGATTGCTTTTGAGCATCTTGGAATGAATGTTGAGTTTTTAAGAGTCCGTTTAAGGCGTCTTGTGTGCATTGCTTTTGAAACTGAAGATGCCTTAGAGATGAAAAGATACTTTGCATATAAAAATGAAGGCAATCGAGCAGATGATGAAATAAAGAACATGGAAATCAAGCTTGAAGAGTTGAAAGGAGCTTGTAATGACTTTGGTGGTTATATTCAAAGTTTGAAGACCAAAGCTGAAAGCTATCAACACAAGTTTCAAAAAGAGGTTGATGCTCATTGGTGA 1278 0.3678 MLEMAIGDEKKRERMVKKEVVEFQQNDHNQVVTQENVPLAQLSRRSPLTMDKQSKAMENINKLLSSPKKPVAYSEAQKFASAMKVTTDATTSRGEAMSSAVIRAEELQSNLGQEFPSFVKSLVRSHVASCFWMGLPVAFCKKHLPDKDTTITLEDEYGKEYNTKYIAYKTGLSADKENPDTNVSACNNSSKRKQGKSVPIDIQKKKKTDMARLEIKPRNKSSKQSEKDNEESLTQRFEGFKMLKFKDVKGFENFSIIVDGVAIDVEFSNEVRNKYYKLCYSQRAFLHENLIKGMNHKLIAGIIFEIVNIADAIKLSVLATPRIEFTNWDKTLIAFEHLGMNVEFLRVRLRRLVCIAFETEDALEMKRYFAYKNEGNRADDEIKNMEIKLEELKGACNDFGGYIQSLKTKAESYQHKFQKEVDAHW* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0580 425 Coils Coil 375 395 - -
Aev01g0580 425 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 11 174 IPR044837 -
Aev01g0580 425 MobiDBLite consensus disorder prediction 177 196 - -
Aev01g0580 425 Gene3D - 95 177 IPR015300 -
Aev01g0580 425 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0234100-LIKE 11 174 - -
Aev01g0580 425 SUPERFAMILY DNA-binding pseudobarrel domain 113 171 IPR015300 -
Aev01g0580 425 MobiDBLite consensus disorder prediction 197 231 - -
Aev01g0580 425 SMART B3_2 118 189 IPR003340 GO:0003677
Aev01g0580 425 MobiDBLite consensus disorder prediction 177 231 - -
Aev01g0580 425 CDD B3_DNA 116 170 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0580 Aev-Chr1 5350547 5356385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0580 95 174 B3 DNA Binding Superfamily AT5G42700 53.750 6.15e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0580 - - gmx:100819237 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0580 01 5350547 5356385 Aev01g0580 01 5350547 5356385 ECH