Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0578 ATGGATAGTGGTGGAGGATCATCACTACTACCAAATCAGGATCAAGAGAATTCTATTATAGTCTCAGCACTAACCCATGTTATCTCATCTAGTTCCGATGATGTTTCTACTCCCACTCTTGCCCTTGATTATAATGATGCAAATCTCCCCACCAACTATTACCAAATGCATGTGAATAACAACAAGAACTCCCATGAAGAAATTGCAAAACTTCCCTACAACCACCACCAGGAATATTCATCCACCACATCATCATCATGGCCTCCTCGTGCTGACACGTGTCCCGTGTGCCAAATCAACGGCTGCCTGGGCTGCAACTTCTTCTTAACGACACGAGAGGAAGATGAAAAGCTAAAGGGAACAACAAAATTGGAAGTGGAAGAGGCAAGCAATATTGGCATTAAGAAGAGCAAGAAATACAGGGGAGTGAGGCAGAGGCCATGGGGGAAGTGGGTAGCTGAAATTCGAGACCCACGAAGGGCCACTCGGGTTTGGCTTGGAACCTTTGAAACCGCTGAGAAAGCTGCAAGAGCTTATGACAAAGCTGCCATAGAGTTTCATGGTGCAAAAGCCAAGACCAATTTTGGGTTATTAGTGGAGAATGAGCATAATAATAAGGAGCAAGTTCGAGAGGATGTTGTTGCAGGGGTTATTAGAGAAAAAACAAAGCCAACTATTTTGTCATTCTCTTCATCATCTCAAAGCCACTGCATAGCAATGGCAAGAGCGGCTCTCCTCCACTTGATACGGTCACAGAGCAGACACCATTTCTCTACAAATGCAACTTCAGCATATCAGCGTTTTAGGTCCTCAACATGTGGGTGGCGCATTAGTGCTAATCCTACTTTCAAAGCTTCCTCCCAACATGCTGCTACCCAAATAAGATTGGCATCTGCTACCCAAATAAGGTTGTCATCTCAAGCCACAACTACAGAGGAAGACAACAAGATCAGCATTGGACCTCGCGGTGGAGGACGATCCGGCGAAGATGACAAAGAGGCTGGAGTTGTTTATTATGGTCCAATCTCAAATACCATAAAGAAAGTAAAACTTCTGTCTCTCTCTACTTGCTGCCTCTCTGTATCGTTGGGTCCGGTCATAACCTTCATGACATCTCCTGATATGAACGTCATACTGAAGGGTGCAGTAGCATCATCTGTGATATTCTTTAGTGCTACTACCACTTTTGCGCTTCACTGGTTTGTTAGCCCGTACATTCACAAACTAAGGTGGCAGCCTGGTTCAGACAGCTTTGAGGTGGATATGATGACCTGGCTGGCTACTTTCACTCCAAAGACTATCAAGTTTTCTGATATTCGACCGGCGGAGACCAATAGGCCTTTTGTGACGTTTAAGGCTAATGAGAATTTTTACTTTGTTGACACTGAGCATTGTCACAATAAGGCACTTCTGGCTAGACTCACCCCACAAAAGGTTGCACATGAGTCAGCTTTCAAGAACTTGTGA 1467 0.4465 MDSGGGSSLLPNQDQENSIIVSALTHVISSSSDDVSTPTLALDYNDANLPTNYYQMHVNNNKNSHEEIAKLPYNHHQEYSSTTSSSWPPRADTCPVCQINGCLGCNFFLTTREEDEKLKGTTKLEVEEASNIGIKKSKKYRGVRQRPWGKWVAEIRDPRRATRVWLGTFETAEKAARAYDKAAIEFHGAKAKTNFGLLVENEHNNKEQVREDVVAGVIREKTKPTILSFSSSSQSHCIAMARAALLHLIRSQSRHHFSTNATSAYQRFRSSTCGWRISANPTFKASSQHAATQIRLASATQIRLSSQATTTEEDNKISIGPRGGGRSGEDDKEAGVVYYGPISNTIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASSVIFFSATTTFALHWFVSPYIHKLRWQPGSDSFEVDMMTWLATFTPKTIKFSDIRPAETNRPFVTFKANENFYFVDTEHCHNKALLARLTPQKVAHESAFKNL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0578 488 SMART rav1_2 139 202 IPR001471 GO:0003700|GO:0006355
Aev01g0578 488 CDD AP2 138 195 IPR001471 GO:0003700|GO:0006355
Aev01g0578 488 PANTHER UNCHARACTERIZED 243 487 IPR009724 -
Aev01g0578 488 SUPERFAMILY DNA-binding domain 139 197 IPR016177 GO:0003677
Aev01g0578 488 MobiDBLite consensus disorder prediction 305 330 - -
Aev01g0578 488 Gene3D AP2/ERF domain 138 197 IPR036955 GO:0003700|GO:0006355
Aev01g0578 488 PRINTS Ethylene responsive element binding protein signature 140 151 IPR001471 GO:0003700|GO:0006355
Aev01g0578 488 PRINTS Ethylene responsive element binding protein signature 162 178 IPR001471 GO:0003700|GO:0006355
Aev01g0578 488 Pfam AP2 domain 139 188 IPR001471 GO:0003700|GO:0006355
Aev01g0578 488 Pfam TMEM70/TMEM186/TMEM223 protein family 336 473 IPR045325 -
Aev01g0578 488 ProSiteProfiles AP2/ERF domain profile. 139 196 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0578 Aev-Chr1 5339809 5346397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0578 14 198 AP2-EREBP Transcription Factor Family AT4G34410 40.000 2.24e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g0578 TMEM70 4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0578 - - gmx:100814608 362.459