Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0574 ATGGACACGATGTCAATGATGATGATGCACATTGAAAACTTCCCTGAATTACTATCCGAACCTTTTTACAACACCACCACCACCGTTCCCATATTGAATGTACCACCACCGGCAAATGACGTCATCAACTTCCCTGTGATGACGTCATCATCATCACCACCTCTTCAACAGAATAACAATATCACATCATCGTCGGGGAGGTATAGGATGAACCATAGTAACAACAATAATAATAATAATTGTTCTTCTTCGTTTGCGGCGATGAGGGAAATGATATTTAGAATAGCGGTGATGCAACCGATTCAGATAGACGCGGAAGCAATAAAGGCGCCGAAGCGGAGGAACGTGAAGATCTCGAAGGACCCTCAGAGCGTAGCGGCGAGGCATAGAAGGGAGAGGATCAGCGAGAGGATAAGGATCTTGCAGAGATTAGTGCCTGGAGGAACAAAGATGGACACTGCTTCGATGTTAGATGAAGCAGTGCACTATGTCAAATTCTTGAAGAAGCAGGTGCAGAGGTTGGAACAAGCAGGGGCAAATAATAATACACCAATTGGTGGATCGTTAGGGATGTCAAGTGCTAATGTTGTCAATTATTCTGCTTTCTTGATGAAAGGTTGCGCCCAACAACCTTATCATATGCTGGGTTCTAGTTCCAACCAGCAATTGCTCAGCTGA 678 0.4454 MDTMSMMMMHIENFPELLSEPFYNTTTTVPILNVPPPANDVINFPVMTSSSSPPLQQNNNITSSSGRYRMNHSNNNNNNNCSSSFAAMREMIFRIAVMQPIQIDAEAIKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAVHYVKFLKKQVQRLEQAGANNNTPIGGSLGMSSANVVNYSAFLMKGCAQQPYHMLGSSSNQQLLS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0574 225 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 27 211 - -
Aev01g0574 225 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 27 211 IPR045843 GO:0003700|GO:0006355
Aev01g0574 225 MobiDBLite consensus disorder prediction 47 77 - -
Aev01g0574 225 SMART finulus 124 173 IPR011598 GO:0046983
Aev01g0574 225 Pfam Helix-loop-helix DNA-binding domain 127 167 IPR011598 GO:0046983
Aev01g0574 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 167 IPR011598 GO:0046983
Aev01g0574 225 Gene3D - 116 184 IPR036638 GO:0046983
Aev01g0574 225 Coils Coil 157 177 - -
Aev01g0574 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 177 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0574 Aev-Chr1 5281782 5282459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0574 86 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 91.209 1.55e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g0574 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0574 - - gmx:100796649 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0574 01 5281782 5282459 Aev01g0574 01 5281782 5282459 ECH