Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0559 ATGCCCAGTAATTCGACACCAACAAGAATGAATGACCAACTTTCGAAACCGACATCAATATTTGGGCTCCGTTTATGGGTGGTTGTTGGTGTCTGTTTCGGAGCAGCCTTCGTGCTCCTCCTCGTACTCATCTCCATCTGGCTCGCTTCAAAGTGCTCCTCTGGCTCCAAAACCAAACGCTCCACAATCCCCGACGTCTCCAAAGAGATCCAAGAGATCAGGGTCGAACAACATGATTCCTTTCCCTCTTCTTCCCCCAAGCCCAACGGGCCTACTCTCCAGCTCGACCCGGTTCCCGAGCCCGACCTGGTTCCCGGGCTCGACCGTCAGGCCCTGCCGACAGAAGAAGACAACAACAATAATGGGGTTTTGGGGTTTAGCAGAATTCAGTTTGAAATTGGGAAGAACCATAGAATCTCGTACCCGGAGCGCGCGTTTGTTAGGTCCTCTTCGCAGTCGCATGGAAGCGGAGAGGCTACTCGACCGTTGGATCATCAGGCTCCTACGGTGATACCTGAGGTCTCGCATTTAGGGTGGGGGCATTGGTACACACTCAGGGAGCTTGAGGATTCCACCAATGGGTTCGCTGATGAGAATGTTATTGGCGAAGGGGGTTATGGGATCGTCTACCATGGCGTTTTGAAGGATAACACTCATGTTGCTATTAAGAATTTGCTCAATAACAAGGGACAAGCTGAGAGAGAGTTCAAGGTTGAAGTAGAAGCTATTGGACGAGTTCGGCATAAGAATCTTGTGAGGTTGCTCGGGTATTGTGCTGAAGGAGCTCATAGAATGCTTGTGTATGAGTACGTTGATAATGGAAATTTGGAGCAGTGGCTACATGGGGATGTTGGGCCTTCAAGTCCTCTAACTTGGGATATTAGAATGAACATAATTTTGGGAACTGCAAAAGGGTTAACTTATCTTCATGAGGGGCTCGAACCAAAAGTTGTCCACCGCGATATTAAATCAAGCAACATTTTGATTGACAGGCAGTGGAATTCAAAGGTGTCCGATTTTGGACTCGCCAAGCTCCTTGCCTCTGATAGCAGCTATATTACAACCCGTGTAATGGGTACATTTGGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTGTATAGCTTTGGGATTCTTATAATGGAAGTAATTACCGGTAGGAATCCTGTCGATTATAGCCGGCCTCCAGAGGAGGTGAATTTAGTGGACTGGCTCAAGAAGATGGTTGGTAACAGAAATGCAGAGGGAGTGTTGGATCCCAAACTACCTGAGAAACCGTCTTCAAGGGCATTAAAGAGAGCACTTCTTGTAGCTTTACGCTGCACCGACCATAATGCACAAAAGCGGCCTAAAATGGGGCATATTGTGCACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGTAGAGCTAGAAGGGAGTCAGGGCATTCACCTAAGAATAGAGTAGATGATAGATTGAAAGAAGAGGCAATTGTTTCCAGCGATGAGTCATCGAGACAAGATGAAACCGTCAGGAAGTGA 1548 0.4735 MPSNSTPTRMNDQLSKPTSIFGLRLWVVVGVCFGAAFVLLLVLISIWLASKCSSGSKTKRSTIPDVSKEIQEIRVEQHDSFPSSSPKPNGPTLQLDPVPEPDLVPGLDRQALPTEEDNNNNGVLGFSRIQFEIGKNHRISYPERAFVRSSSQSHGSGEATRPLDHQAPTVIPEVSHLGWGHWYTLRELEDSTNGFADENVIGEGGYGIVYHGVLKDNTHVAIKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDRQWNSKVSDFGLAKLLASDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVGNRNAEGVLDPKLPEKPSSRALKRALLVALRCTDHNAQKRPKMGHIVHMLEAEDSPYKEDRRARRESGHSPKNRVDDRLKEEAIVSSDESSRQDETVRK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0559 515 ProSiteProfiles Protein kinase domain profile. 195 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0559 515 MobiDBLite consensus disorder prediction 77 91 - -
Aev01g0559 515 PANTHER OS01G0323000 PROTEIN 4 508 - -
Aev01g0559 515 SMART serkin_6 195 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0559 515 MobiDBLite consensus disorder prediction 76 119 - -
Aev01g0559 515 Gene3D Transferase(Phosphotransferase) domain 1 271 483 - -
Aev01g0559 515 Gene3D Phosphorylase Kinase; domain 1 172 270 - -
Aev01g0559 515 ProSitePatterns Protein kinases ATP-binding region signature. 201 223 IPR017441 GO:0005524
Aev01g0559 515 MobiDBLite consensus disorder prediction 467 515 - -
Aev01g0559 515 SUPERFAMILY Protein kinase-like (PK-like) 179 468 IPR011009 -
Aev01g0559 515 CDD STKc_IRAK 201 467 - -
Aev01g0559 515 PANTHER RECEPTOR-LIKE KINASE PLANT 4 508 - -
Aev01g0559 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Aev01g0559 515 Pfam Protein kinase domain 196 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0559 Aev-Chr1 5086385 5088990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0559 172 469 Trihelix Transcription Factor Family AT1G70460 46.865 2.76e-88 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aev01g0559 Pkinase 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0559 - - lang:109350106 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0652 05 4522548 4525127 Aev01g0559 01 5086385 5088990 ECH
Aev01g0559 01 5086385 5088990 Aev01g0559 01 5086385 5088990 ECH