Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0551 ATGGCAACAATTGAAGTTATCTCAACCAGTACAATCCAAGCACCAAAACACGTTGACTCAACTCATCACAAAATCCATCTAACCCCATGGGATCTCGAATCCCTCCCACTCGAAATGAACCAAAAAGGCCTTATTTTCAACAACACAACGCATCAAACCCAAATCAACCATCTCATTCACTCACTTTCCATTACCCTTTCCTTCTTCCCACCCCTCGCAGGTCGTCTCATAATTACCAAACACGAACAACACAACACTTCCTCTTCCTACATTTTGTGCAACAACGTTGGAGCACTCTTTGTCCACGCATCAGCTAACAACACTCGTGTCTCTGATATCCTTCTACCCAAATACGTTCCTCCCATTGTTCACTCCTTCTTCCCACTTAACGGAGTTAGAAACTACCAAGGCACATCACAGCCTCTTCTGGCGGTTCAGGTCACGGAGTTAGTTGACGGCGTCTTCATCGGTTTCACCATCAACCATGTTGTCGCTGACGGCGAATCTTTATGGCGGTTCGTAAATTCATGGTCAGAAATCTCACGTGGATGCAATAAACCATCAAAAATCCCTTCACTAGAACGGTTCTTTCTCAATGGAATTGAACCGCCGCTACGATTTCCGTCTATGGATCAAAAGCAAACCGCCGAAAACACAAACACAGAACCGCCACTAAAAGTGCGGATCTTCAACTTCACGAAGGAGAAAATAGCACAAATCAAAGCTAAAGCCAACTCAGAAGCTGGAACAGAGAAGATATCATCACTACAAGCTCTTCTCAGTCACCTATGGCGCTCTGTGATTCGTTCCCAAAGTATTGACCCTATGGAAGATGTTTCTTACTCCATGGCAATAGGTGTGGCGATGAACAGGATGGTCGCATCTCATGGCGCTGAGAAGGTTAGGACTCACTATGAGTCCATGGCCAGAAAACCGCTTCTGCTTTGCCCTTCGGGTGGCCTCATTAGTAGGAAGGCTTTGGCCACTGGGAGTTCTCCCAGATTCAATGTTTATGGTAATGACTTTGGTTGGGGGAAGCCTGTGGCGGTTAGGACTGGCGGTTCTAATAAGATTGAGGGGATGATTGCTGTGTTTGGTGGGGCCCATGAAGGTAGTGTTGATATTGAAGTGTGCCTCCCTTATGAGGTTTTGCACACCATGGGAAATGACCTTGAGTTCCTCTTATGA 1188 0.4613 MATIEVISTSTIQAPKHVDSTHHKIHLTPWDLESLPLEMNQKGLIFNNTTHQTQINHLIHSLSITLSFFPPLAGRLIITKHEQHNTSSSYILCNNVGALFVHASANNTRVSDILLPKYVPPIVHSFFPLNGVRNYQGTSQPLLAVQVTELVDGVFIGFTINHVVADGESLWRFVNSWSEISRGCNKPSKIPSLERFFLNGIEPPLRFPSMDQKQTAENTNTEPPLKVRIFNFTKEKIAQIKAKANSEAGTEKISSLQALLSHLWRSVIRSQSIDPMEDVSYSMAIGVAMNRMVASHGAEKVRTHYESMARKPLLLCPSGGLISRKALATGSSPRFNVYGNDFGWGKPVAVRTGGSNKIEGMIAVFGGAHEGSVDIEVCLPYEVLHTMGNDLEFLL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0551 395 Gene3D - 210 290 IPR023213 -
Aev01g0551 395 Gene3D - 291 392 IPR023213 -
Aev01g0551 395 Pfam Transferase family 296 393 - -
Aev01g0551 395 Pfam Transferase family 3 285 - -
Aev01g0551 395 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 287 - -
Aev01g0551 395 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 287 - -
Aev01g0551 395 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 288 394 - -
Aev01g0551 395 Gene3D - 2 209 IPR023213 -
Aev01g0551 395 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 288 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0551 Aev-Chr1 5030328 5032165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0551 61 382 Monolignol Biosynthesis Gene Families AT5G48930 25.648 1.04e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0551 - - gmx:100500257 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0551 01 5030328 5032165 Aev01g0551 01 5030328 5032165 ECH