Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0548 ATGTGGGATCTCAATGACTCACCCGATCAGAGAAAAGACGAGGAATCCGAAGAAGGTTGCTCTTCCCTCAACGATGATAATAACAATAACAACAACAATAACAAAGGAAAGAGAGTTGGATCTGTTTCCAATTCAAGCTCTTCCGCAGTAGTAATCGAGGACGGATCAGAAGAAGAAGAAGATGATGAAGGTATCAGAACCATGACGATGAAGAGAAGAAACAGTAGCAAAATATTTGGATTCTCTGTAACCCACAACGATGACGATAATGATGAGTCCATCGACACTGACCCTCCGGTCACACGGCAGTTTTTTCCTGTCGAAGAGGCTGACATCGCCGTCGTCTCTGTTTGCGGCGGCGGCGGTGGTGGTGGCGGTGGTGGTGGGTCCTCTGCTTTCCCTCGAGCTCACTGGGTTGGTGTGAAGTTTTGTCAATCGGAAGCACTTGGTGGTGGAAACTCATCATCAATGGAAGTTTCTCAGCCTCTGAAGAAAAGTCGCCGTGGACCAAGGTCGAGAAGCTCACAGTATAGAGGAGTTACTTTTTACAGAAGAACTGGTCGATGGGAGTCTCATATTTGGGATTGTGGAAAACAAGTTTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTCCGAGGAGTAGAGGCTGACATAAATTTCAACATAGAAGATTATGAAGAAGACTTGAAGCAGATGAGCAATCTGACCAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGGTTTCCAAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTAGGGAAAAAGTACGTCTATCTGGGTTTGTTTGACACTGAGATTGAAGCTGCAAGGGCCTATGATAAAGCAGCGATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTATGATAACGAGTTTAATTCCGAATCGACGACAGGAAATGGTGGAGATCACAATTTGGATTTAAGTTTGGGGAATTCGAGCTCCAAGCCTGGCAATAATCAAGCCCCAAATGTTGCAACTCACGATCAGCACATGCCATCTGAATGGCGGAACGGAGCAACCAGGGCTAATAAGCTGGTGAATATACTACCGAAACCGTGTAATGGAAGGGATGTGCACGGGGAGAGTGAAGCCACGTTGCGGTTGTTAAGTCAAAGTCAACTCCATTCTTCATCAACCTCTAATGAAATGCAGAGATATGGTCCCTACAGGTCTCCAGGAGACTCTCAATTGATTCACAATTTTTCACACCTTCAACCACCCAATTTTCATTTTCCTAGCAGCAGCAATGGAGGTCATCATCGCATTGGAAGTGATCTTACATTATCAATGTCGGATCAACAACACCACCACCACCAATGGCAAGCCGGACCGCCTCATCATCCGCCACATTATTTGGCAAATGCTGCAGCATCATCAGGATTCCCACCGCAGATTATTAGACCCTCTTCACAAACCAACTGGCTGCAGAAAAATAATGGGTTCCACACTCTCATGAGACCCTCCTGA 1593 0.4614 MWDLNDSPDQRKDEESEEGCSSLNDDNNNNNNNNKGKRVGSVSNSSSSAVVIEDGSEEEEDDEGIRTMTMKRRNSSKIFGFSVTHNDDDNDESIDTDPPVTRQFFPVEEADIAVVSVCGGGGGGGGGGGSSAFPRAHWVGVKFCQSEALGGGNSSSMEVSQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNEFNSESTTGNGGDHNLDLSLGNSSSKPGNNQAPNVATHDQHMPSEWRNGATRANKLVNILPKPCNGRDVHGESEATLRLLSQSQLHSSSTSNEMQRYGPYRSPGDSQLIHNFSHLQPPNFHFPSSSNGGHHRIGSDLTLSMSDQQHHHHQWQAGPPHHPPHYLANAAASSGFPPQIIRPSSQTNWLQKNNGFHTLMRPS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0548 530 MobiDBLite consensus disorder prediction 473 508 - -
Aev01g0548 530 MobiDBLite consensus disorder prediction 151 176 - -
Aev01g0548 530 SUPERFAMILY DNA-binding domain 175 233 IPR016177 GO:0003677
Aev01g0548 530 MobiDBLite consensus disorder prediction 327 369 - -
Aev01g0548 530 CDD AP2 176 233 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 CDD AP2 267 327 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 SUPERFAMILY DNA-binding domain 267 327 IPR016177 GO:0003677
Aev01g0548 530 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 528 - -
Aev01g0548 530 MobiDBLite consensus disorder prediction 22 52 - -
Aev01g0548 530 Pfam AP2 domain 267 316 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 Pfam AP2 domain 176 224 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 MobiDBLite consensus disorder prediction 1 18 - -
Aev01g0548 530 ProSiteProfiles AP2/ERF domain profile. 268 325 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 528 - -
Aev01g0548 530 Gene3D AP2/ERF domain 175 234 IPR036955 GO:0003700|GO:0006355
Aev01g0548 530 Gene3D AP2/ERF domain 267 326 IPR036955 GO:0003700|GO:0006355
Aev01g0548 530 MobiDBLite consensus disorder prediction 1 68 - -
Aev01g0548 530 PRINTS Ethylene responsive element binding protein signature 307 327 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 PRINTS Ethylene responsive element binding protein signature 269 280 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 SMART rav1_2 268 331 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 SMART rav1_2 176 238 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 ProSiteProfiles AP2/ERF domain profile. 176 232 IPR001471 GO:0003700|GO:0006355
Aev01g0548 530 MobiDBLite consensus disorder prediction 326 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0548 Aev-Chr1 4986655 4991790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0548 1 355 AP2-EREBP Transcription Factor Family AT4G36920 66.485 3.27e-136 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev01g0548 AP2 3.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0548 K09284 - gmx:100794096 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0665 05 4624190 4627340 Aev01g0548 01 4986655 4991790 PCT