Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0544 ATGTATGGCAGAAAAGCTTGTCAGCTTGTCAAAGAATTCGCTAGCGCAGAAAAAGGCCAGTTCACCCAATTCAATAGTGACCTGCTTGAACAAGTAGTTGCAGAATGTAGTCAACATCACCTTGAGCTTCAGTCCCTGATAAGATATAATCGAGCAGAAATTATAAGAAGCCTGTTATGGAAAATAGGGCATGTTCTTCCTCAGGAGATTGAGGAGAAGCTTTGTCACTCGGAGGAAGAGTATTTCAAGAAGCATTCTGCAGCAGTGAAAACTTATATGTCAAAAATGATGGTTGATCTCACTGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATAGGAAATGGTATTGTGCTTAGTGATGATAAGACTGCCAATTTTGCCCGTGACTCAATCCACTTTCTCAAGCGAACTGATGCTGAGCAATTCATCTCACAGGGCTTATTGAAGGAGCTCACAGGTTGA 486 0.4198 MYGRKACQLVKEFASAEKGQFTQFNSDLLEQVVAECSQHHLELQSLIRYNRAEIIRSLLWKIGHVLPQEIEEKLCHSEEEYFKKHSAAVKTYMSKMMVDLTVDMVPPKDPYIKVRVLDDIGNGIVLSDDKTANFARDSIHFLKRTDAEQFISQGLLKELTG* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0544 161 SUPERFAMILY GINS helical bundle-like 1 108 IPR036224 -
Aev01g0544 161 CDD GINS_A_psf1 3 96 IPR005339 GO:0000811|GO:0006260
Aev01g0544 161 Gene3D - 1 48 - -
Aev01g0544 161 Gene3D - 49 96 - -
Aev01g0544 161 PANTHER PARTNER OF SLD5 1 48 IPR005339 GO:0000811|GO:0006260
Aev01g0544 161 PANTHER PARTNER OF SLD5 49 157 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0544 Aev-Chr1 4908387 4911107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0544 1 161 Core DNA Replication Machinery Family AT1G80190 50.990 1.73e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0544 K10732 - csv:101205409 244.202