Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0540 ATGGCCGTTGAGCTTATGATGGGTACTTACAGAAACGATTACACTAGTTTCATCACTTCCAAAGCCGAAGAAAACGCTGTCCAAGAAGCCGCGTCTGGTTTAGAGAGCGTTGAGAAGCTCATAAGGTTACTCTCTCACACTCAGCAACAACACTTTAATCCTTCTTCGAGTCCAAACCCTAACCAAATCGCTAGGGATTGCAAAGCCGTAGCAGACGACGCCGTTTCGAAGTTCAAACGAGTTATTTCTCTCCTCGGCCGAACCCGAACCGGCCACGCCCGGTTCAGGCGAGCCCCTGTTTCAACATCACCATCAGAACAACAAATCCAACCCAAAAATTCAGAACACAGAGTTTACCATGCGACGCCGTTGCAGCAGATCCCACCGCCACCGCCACCGAATCTCGTTCGTAGCAACGAACATAGCTTGATCCCCAAAAACGGCGTCGTTGAGAGGAAGGAAACGTCGTCCAAGACTATTATTAACTTCTCGTACTCCTCTGCCGCTAACTCGTTCATCTCGTCGCTCACCGGAGACGCCGATGCGAAACCGCACCAGCAGCAACCGTCGTCGTCTTCGCCGGCGCCGGCGTTTCAGATCACGAACATGTCTCAGGTGTCGTCGGCGGGGAAGCCACCTCTCTCATCGTCTTCGTTGAAGAGGAAGTGTAGCTCCGAGAATTTGGGATCTGGCAAGTGTGCTAGCTCCTCTGGTCGATGCCATTGCTCCAAAAAGAGCAGAAAAATGAGATTGAAAAGAGTGGTGAGGGTTCCAGCTATAAGCTTGAAAATGGCGGATATTCCACCAGATGATTATTCCTGGAGGAAGTATGGACAGAAACCAATCAAAGGCTCTCCTCATCCAAGGTCTGTGGTCGTTGGCGGTGGTCCAGTTGCCGTCGATGATGGTCTAGCCGATGTTGGTGGTGTTATGGCTACCATTGCTGGTTTTTCTGACCGTCGTCTCACCAATGTCAGTGGTGGTCCAACTGTCGTCGATGATCGTTAG 1008 0.5109 MAVELMMGTYRNDYTSFITSKAEENAVQEAASGLESVEKLIRLLSHTQQQHFNPSSSPNPNQIARDCKAVADDAVSKFKRVISLLGRTRTGHARFRRAPVSTSPSEQQIQPKNSEHRVYHATPLQQIPPPPPPNLVRSNEHSLIPKNGVVERKETSSKTIINFSYSSAANSFISSLTGDADAKPHQQQPSSSSPAPAFQITNMSQVSSAGKPPLSSSSLKRKCSSENLGSGKCASSSGRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRSVVVGGGPVAVDDGLADVGGVMATIAGFSDRRLTNVSGGPTVVDDR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0540 335 MobiDBLite consensus disorder prediction 177 239 - -
Aev01g0540 335 Pfam Plant zinc cluster domain 220 266 IPR018872 -
Aev01g0540 335 ProSiteProfiles WRKY domain profile. 263 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g0540 335 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 290 IPR044810 GO:0003700
Aev01g0540 335 MobiDBLite consensus disorder prediction 100 115 - -
Aev01g0540 335 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 18 290 - -
Aev01g0540 335 Pfam WRKY DNA -binding domain 270 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g0540 335 Gene3D WRKY domain 247 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g0540 335 SUPERFAMILY WRKY DNA-binding domain 265 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g0540 335 MobiDBLite consensus disorder prediction 96 116 - -
Aev01g0540 335 SMART WRKY_cls 268 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0540 Aev-Chr1 4873983 4877062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0540 1 289 WRKY Transcription Factor Family AT2G23320 48.355 3.14e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev01g0540 Plant_zn_clust 2.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0540 - - qsu:112030051 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0540 01 4873983 4877062 Aev01g0540 01 4873983 4877062 ECH
Aev01g0540 01 4873983 4877062 Aev05g0671 05 4671333 4672685 PCT