Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0521 ATGTCTCCACCAAATCCACAAGACCATGACGAACCACTATTACTGGACTCACGGCAACAAGAAGAGCTAGAAGAAACAGCCTACGACTCCAACGAGAAGATCGTGGTGGTGGGAATAGACGAGCCCGATGATGACTGGGCCCGGGCCGGGGCCCCGCCGTTTTCATGGAAAAAGCTGTGGATGTTCACGGGCCCGGGCTTTCTCATGAGCATCGCGTTCTTGGACCCTGGGAACCTGGAAGGGGACTTGCAGGCCGGAGCCATAGCAGGGTACTCGCTGTTGTGGCTGCTCATGTGGGCCACGGCCATGGGCCTACTGATCCAGCTCCTCTCGGCCCGGCTCGGTGTGGCCACTGGGAGGCACCTGGCGGAGCTGTGCAGGGAAGAGTACCCATCGTGGGCCCGGATGGTGCTGTGGGTGATGGCGGAAGTGGCTCTTATTGGCTCCGATATTCAGGAAGTTATTGGTAGCGCCATTGCTATCAGGATTCTCAGTAATGGGTTCGTGCCTCTTTGGGCTGGGGTCATCATTACTGCTCTTGATTGTTTTGTTTTTCTCCTTCTTGAGAACTATGGTGTGAGGAAACTGGAAGCTTTTTTTGCTGTTCTTATTGGGATAATGACACTTGCGTTTGCTTGGATGTTTGGTGATGCAAAGCCTAGTGGCAAGGAATTGCTTCTTGGTGTTTTGATTCCGAAACTTAGCTCCAAAACTATTCAGCAAGCTGTTGGAGTTGTGGGTTGTATCATTATGCCTCACAATGTGTTCTTGCACTCTGCTCTTGTTCAATCAAGGCGGGTTGACCACCGGAATAAAGGCCGAGTTCAAGAAGCTATTAATTATTACTCCATAGAGTCCACCATTGCCCTAATAGTCTCCTTTGTTATCAATATATTTGTCACAACTGTGTTTGCTAAAGGGTTTTATGGTACTGAACTAGCAAACAACATTGGTCTTGTAAATGCCGGACAGTATCTTCAGGATAAATATGGTGGTGGACTGTTTCCAATTTTATACATATGGGGTATCGGGTTATTAGCAGCAGGGCAAAGTAGCACGCTCACTGGTACTTATGCCGGACAATTCATCATGGGAGGTTTTCTGAATTTAAGATTGAAAAAATGGATGAGAGCGTTGATTACACGAAGCTTCGCAATCATCCCAACCATGATAGTGGCTCTTGTTTTCGATACCACTGAGGAGTCATTAGATGTTCTGAATGAATGGCTTAATGTTCTTCAGTCAGTTCAGATCCCCTTTGCGCTTATTCCGTTGCTTTGTTTGGTGTCGAAGGAGCAGATAATGGGAAGTTTCAAAATTGGCCCTGTCCTCAAGGTTGTTTCTTGGCTCGTGGCTGCTCTGGTGATAGTGATTAATGGCTACCTTTTGCTGGAATTCTTCTCCTCTGAAGTGAATGGAGCATTAGTTGGTGCTATAGTTTGTGCCATAACTGCTGCATATGTTTTCTTCATAATTTACCTTGTTTCAAGGGCCTGTTCCTTTACACCCTGGCAAAGAAAACCACAACAAAAGGCGATTTCTAACTCTGACAGTTAA 1557 0.4701 MSPPNPQDHDEPLLLDSRQQEELEETAYDSNEKIVVVGIDEPDDDWARAGAPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGVIITALDCFVFLLLENYGVRKLEAFFAVLIGIMTLAFAWMFGDAKPSGKELLLGVLIPKLSSKTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEAINYYSIESTIALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQDKYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALVFDTTEESLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFKIGPVLKVVSWLVAALVIVINGYLLLEFFSSEVNGALVGAIVCAITAAYVFFIIYLVSRACSFTPWQRKPQQKAISNSDS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0521 518 Hamap Divalent metal cation transporter MntH [mntH]. 47 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 57 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 18 515 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 242 265 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 138 164 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 168 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 411 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 193 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 377 394 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PRINTS Natural resistance-associated macrophage protein signature 349 368 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 Pfam Natural resistance-associated macrophage protein 80 441 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aev01g0521 518 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 18 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0521 Aev-Chr1 4692450 4696112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0521 6 511 Inorganic Solute Cotransporters AT2G23150 77.451 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0521 K21398 - gmx:100807811 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0521 01 4692450 4696112 Aev01g0521 01 4692450 4696112 ECH
Aev05g0690 05 4808445 4810684 Aev01g0521 01 4692450 4696112 PCT