Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0497 ATGGCGAAAGCAGAACCCAGCAACAGCAATGGCAGTAGCAGCGGCGAAGAAGGCGGCGAAGAAGACGACCACGCAGCATGGAGAGCAGCCATGGATTCCGTCGCCGGAACCACCAACAGCTACACTAATGATCAAAATCACAAACCCAAACGGAAAAGATTAAGCACTACCAACTCAAGTTTAATCCTCTCACAGATAATAAAGTTTCCAACTTTTTCTTTGTTCTACATCACTTCATCGATCACAGAAACCAGTACCATGGAATTTGAATTTCAGCAACCTACCTTCTCCATTAATAATGGTGCTAAGTACAGTAATGAAGATGAGAAGGTTCTTATCACTCTGTTTTCATCATCAGAGTTAAAGAACAAAGTTGAAAGTTTGCAGTTAGAAATTCCCATTTATCGTACCCTTTTAACTCTAGAAGGTTGCTGTGAGGGTTTGGTAGATACATTACTTAGGTGTACACCAGACATACCTCCCACCTTTCTCAATGGCAATGACTGTGATATGGTTCAAAAGCTTTCTAGAATGATATGCGATTCAACGATACAACACCGCCATGGAGTTCATATCGATAATCTCTTCGTGTTTATCTTGGTGTCCAAATATTCTTGCCACTACAATGTAGTGAACTCCTCTGATTTCTCCATGGATGATCAACAAGTTCTATCACACGAGTTGGTGCAGAGTTTGGCGTGTGAGAGCAGCGTGTATTCTCTGCCAGCCGGAGCAAGCGCAATCAAGAAGTTGGAGGCTCAAGACTATATCGAGGGCAATTGTGCTATATGCTTGGAGGGTTTCTTCAATGGCAATGAAGGGGCCAAGTTGCCCTGTTCTCATGTTTATCATTGCCATTGTGTTCTAGAATGGTTTGTTCAAAGTGGAACATGCCCTATATGTCGTTTGCCTTGTACTCAAACATTATAG 930 0.4247 MAKAEPSNSNGSSSGEEGGEEDDHAAWRAAMDSVAGTTNSYTNDQNHKPKRKRLSTTNSSLILSQIIKFPTFSLFYITSSITETSTMEFEFQQPTFSINNGAKYSNEDEKVLITLFSSSELKNKVESLQLEIPIYRTLLTLEGCCEGLVDTLLRCTPDIPPTFLNGNDCDMVQKLSRMICDSTIQHRHGVHIDNLFVFILVSKYSCHYNVVNSSDFSMDDQQVLSHELVQSLACESSVYSLPAGASAIKKLEAQDYIEGNCAICLEGFFNGNEGAKLPCSHVYHCHCVLEWFVQSGTCPICRLPCTQTL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0497 309 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 43 304 - -
Aev01g0497 309 SUPERFAMILY RING/U-box 260 307 - -
Aev01g0497 309 Pfam Ring finger domain 260 302 IPR001841 -
Aev01g0497 309 SMART ring_2 261 301 IPR001841 -
Aev01g0497 309 MobiDBLite consensus disorder prediction 1 15 - -
Aev01g0497 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 237 308 IPR013083 -
Aev01g0497 309 MobiDBLite consensus disorder prediction 1 54 - -
Aev01g0497 309 PANTHER F6A14.12 PROTEIN-RELATED 43 304 - -
Aev01g0497 309 ProSiteProfiles Zinc finger RING-type profile. 261 302 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0497 Aev-Chr1 4494695 4496023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0497 230 302 C3H Transcription Factor Family AT1G14200 36.986 4.03e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0497 - K11982 lang:109363624 151.369