Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0496 ATGGAATTTGAATTTCAGCAACCTACCTTCTCCATTAATAATGGTGCTAAGTACAGTAATGAAGATGATAAGGTTCTTATCACTCTGTTTTCATCATCAGAGTTAAAGAACAAAGTTGAAAGTTTGCAGTTAGAAATTCCCATTTATCGTACCCTTTTAACTCTAGAAGGTTGCTGTGAGGGTTTGGTAGATACATTACTTAGGTGTACACCAGACATACCTCCCACCTTTCTCAATGGCAATGACTGTGATATGGTTCAAAAGCTTTCTAGAATGATATGCGATTCAACGATGCAGAGCCGCCATGGAGTTCATATAGATAATCTCTTTGTGTTTATCATGGTGTCCAAATATTCTTGCCACTACAATGTAGTGAACTCCTCTGATTTCTCCATGGATGATCAACAAGTTCTATCACACGAGTTGGTGCAGAGTTTGGCGTGTGAGAGCAGCGTGTATTCTCTGCCAGCCGGAGCAAGCGCAATCAAGAAGTTGGAGGCTCAAGACTATATGGAGGGCAATTGTGCTATATGCTTGGAGGGTTTCTTCAATGGCAATGAAGGGGCCAAGTTGCCCTGTTCTCATGTTTATCATTGCCATTGTGTTCTAGAATGGTTTGTTCAAAGTGGAACATGCCCTATATGTCGTTTGCCTTGTACTCAAACATTATAG 672 0.4077 MEFEFQQPTFSINNGAKYSNEDDKVLITLFSSSELKNKVESLQLEIPIYRTLLTLEGCCEGLVDTLLRCTPDIPPTFLNGNDCDMVQKLSRMICDSTMQSRHGVHIDNLFVFIMVSKYSCHYNVVNSSDFSMDDQQVLSHELVQSLACESSVYSLPAGASAIKKLEAQDYMEGNCAICLEGFFNGNEGAKLPCSHVYHCHCVLEWFVQSGTCPICRLPCTQTL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0496 223 SUPERFAMILY RING/U-box 167 221 - -
Aev01g0496 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 222 IPR013083 -
Aev01g0496 223 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 102 218 - -
Aev01g0496 223 SMART ring_2 175 215 IPR001841 -
Aev01g0496 223 PANTHER F6A14.12 PROTEIN-RELATED 102 218 - -
Aev01g0496 223 Pfam Ring finger domain 174 216 IPR001841 -
Aev01g0496 223 ProSiteProfiles Zinc finger RING-type profile. 175 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0496 Aev-Chr1 4491587 4492258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0496 144 216 C3H Transcription Factor Family AT1G14200 36.986 2.16e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0496 - K11982 lang:109363624 150.984