Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0488 ATGTCTGTCTCATCCCCAAACCACTCAACTCTTGACTTGTTCTGCAATGAGCCAACAACCGATGTGGTTTCCTTCGATTCCAACAACTATGAATCCGATGATGTTGGTTTTAATAATGCTACAAATTTCGATGAATCCTATCTTTTGAGCTTATTAGAATCCGAAGTTGATGATCAAGTACATGAAAAAACAGAGTCACTAGGACAACTTTACAGAACATCATGGCTTAGAAATGCTCGAGAAGAAGCTGTGAATTGGATCCTAAAGGTTCATGCTTACTATAGTTTCAGACCCGAGACAGCATATCTTTCTGTAAATTATCTTGATCGTTTCCTTTTCTCCAACACATTCAAGCAAGATAAAGCATGGCCTATTCAATTATTATCAGTTGCATGCGTAGCATTGGCAGCGAAAATGGAAGAAACTAAAGTGCCACTTCTGTTGGACATACAGGTGGCAGATCCTAAGTTCTTGTTTAAGCCAAAAACAGTTCAGAGAATGGAGCTTCTAGTTATGGCTAGTCTCAAGTGGCGATTACGAGCTATAACCCCTTTTGATTTTGTCCATATTTTCATTACAAAACTTCTTACAAGTTCAGCTTCCACATTGGGAGATTTAAGCTGTATTGTTTCTCAAGTCTCAGATGTTATCATCAAAACATGTTTAGTTATGGAGTTCTTGGAGTTTCCATCATCCACGATAGCAGTAGCTGCTCTGTTATATGTAACTGATCAATTTGTTGATGATCAGAAACTACACTGCATCCACAAGAATATAAGCATTGATATGGTGCAGAAATGTTACAACCTTATGAAGCAGAACATTGAGCAAACAGAGTACATTTTGCCAAAGACTCAACAATTAATGCCCTTAAGTCCTACAAGTGTGCTTGATCATGCAGCTATACAAGATACCAGCGATGCTCACAAGTTGCATGCCCTGACCTGA 948 0.3861 MSVSSPNHSTLDLFCNEPTTDVVSFDSNNYESDDVGFNNATNFDESYLLSLLESEVDDQVHEKTESLGQLYRTSWLRNAREEAVNWILKVHAYYSFRPETAYLSVNYLDRFLFSNTFKQDKAWPIQLLSVACVALAAKMEETKVPLLLDIQVADPKFLFKPKTVQRMELLVMASLKWRLRAITPFDFVHIFITKLLTSSASTLGDLSCIVSQVSDVIIKTCLVMEFLEFPSSTIAVAALLYVTDQFVDDQKLHCIHKNISIDMVQKCYNLMKQNIEQTEYILPKTQQLMPLSPTSVLDHAAIQDTSDAHKLHALT* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0488 315 Pfam Cyclin, N-terminal domain 63 179 IPR006671 -
Aev01g0488 315 Gene3D - 181 268 - -
Aev01g0488 315 SUPERFAMILY Cyclin-like 44 179 IPR036915 -
Aev01g0488 315 CDD CYCLIN 80 172 IPR013763 -
Aev01g0488 315 Gene3D - 66 180 - -
Aev01g0488 315 Pfam Cyclin, C-terminal domain 182 276 IPR004367 -
Aev01g0488 315 PANTHER CYCLINS 1 304 IPR039361 -
Aev01g0488 315 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 1 304 - -
Aev01g0488 315 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Aev01g0488 315 SMART cyclin_7 85 173 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0488 Aev-Chr1 4403904 4406514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0488 1 284 Core Cell Cycle Gene Families AT1G70210 38.435 4.89e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0488 K18810 - gmx:100781193 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0488 01 4403904 4406514 Aev01g0488 01 4403904 4406514 ECH