Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0462 ATGATGCAAATCTCGTCCTCCACCAATAAGTACTACCTGCCTGAACTTGAAATGGAAGACTCAACTTTCTTCCATCAATACCCAGTCGACTCATCATTCACATGGCCACTCGATGAATTTGACATCGAATCCTTTTGCGCTTCGACTCCAAAGACCCATTTCTCCAATAACAAACGCTCAAACTTCATAGAAACCACACAAAATAATCACTCTTTCAAAATTATTGAAAGACCAACAAAACAACACAAGATCAACACAACCGCAACCACAAACGCTACTGCCACTACCACTACCTGGAGTAGTGGTAGCAGTAGTGACTTCGTGATTGCAAAAGCTTCGTCGTCTTCATCCTCACAACTCATATCATTCGAGCACTCCAATGCTTCTTCCATTGCTTCACAACAATTTTACAACCCGGAAGCGAAAAATAGTAATAATAAAAATGTTGTTGTGAAGCCTAAAGTGGAGATCAATGGGTGCGGTGAGAACTTGGATTTTGCAGACTATGAAGCCAAAAGCTTCCTGAGCTATGATAAGACGAGCAAGGGCGCGGCGGCGGCCGCCACGACTAGAAACCCAACTCAGGCTCAAGATCATGTGATTGCTGAGAGAAAAAGAAGGGAAAAGCTTAGCCAGAGGTTCATAGCACTTTCAGCCATAGTTCCGGGACTCAAAAAGATGGATAAGGCTTCTGTGTTGGGAGATGCTATCAAGTATCTGAAACAACTACAAGAACAGGTAAAGAGTCTAGAGGAGCAAGTTGCACAGAAAACCGTTGAATCAGCGGTTCTTGTGAAGAGATCCATTCTCTTGGCTGAAGATGATGGATCCTCTTCGAATGAAAACTATGACCAATCATCATCGATTCCTGAGATCGAAGCGAGAGTTTCTGGGAAAGACGTTCTCGTTAGGATTCACTGTGACAAAAAGAGTGGACAACCAGCTATGATACTTAGTGAGATTGAGAGGCATAATCTCAATGTTCAGAGTAGCAGCTTTTTGCCCTTTGGGAATAACACTCTTGATGTTACTATTATTGCTCAGATGAACAATGAAAGCTGCGTGACACCAAAGGATCTCATAAGAAGCTTGAGTCAGGCTTTAAGGCAGTTCATTTGA 1119 0.4272 MMQISSSTNKYYLPELEMEDSTFFHQYPVDSSFTWPLDEFDIESFCASTPKTHFSNNKRSNFIETTQNNHSFKIIERPTKQHKINTTATTNATATTTTWSSGSSSDFVIAKASSSSSSQLISFEHSNASSIASQQFYNPEAKNSNNKNVVVKPKVEINGCGENLDFADYEAKSFLSYDKTSKGAAAAATTRNPTQAQDHVIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEQVKSLEEQVAQKTVESAVLVKRSILLAEDDGSSSNENYDQSSSIPEIEARVSGKDVLVRIHCDKKSGQPAMILSEIERHNLNVQSSSFLPFGNNTLDVTIIAQMNNESCVTPKDLIRSLSQALRQFI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0462 372 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 8 371 - -
Aev01g0462 372 CDD bHLH_AtNAI1_like 196 268 - -
Aev01g0462 372 Coils Coil 233 260 - -
Aev01g0462 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 194 243 IPR011598 GO:0046983
Aev01g0462 372 Pfam Helix-loop-helix DNA-binding domain 197 244 IPR011598 GO:0046983
Aev01g0462 372 Gene3D - 186 258 IPR036638 GO:0046983
Aev01g0462 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 265 IPR036638 GO:0046983
Aev01g0462 372 SMART finulus 200 249 IPR011598 GO:0046983
Aev01g0462 372 PANTHER BHLH TRANSCRIPTION FACTOR 8 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0462 Aev-Chr1 4089567 4092536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0462 116 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.487 5.58e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g0462 HLH 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0462 - - adu:107482661 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0771 05 5388348 5389871 Aev01g0462 01 4089567 4092536 PCT